RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 DOLKQ9UPQ8 538 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 MANSC4A6NHS7 340 aaPredicted RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 RPS6KA5O75582 802 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 GFPT2O94808 682 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 CCNE1P24864 410 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 AMPD2Q01433 879 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 NR5A1Q13285 461 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 PGBD3Q8N328 593 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 ENAHQ8N8S7 591 aaPredicted RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 RBAKQ9NYW8 714 aaPredicted RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 ZC3H4Q9UPT8 1303 aaKnown RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 ARHGEF28Q8N1W1 1705 aaKnown RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 KRT7P08729 469 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 TAC1P20366 129 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 BFSP2Q13515 415 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 CCDC124Q96CT7 223 aaKnown RBP12.06□□□□□ -0.48
FN1-204ENST00000356005 PTPN22Q9Y2R2 807 aa12.06□□□□□ -0.48
FN1-204ENST00000356005 CCDC88AQ3V6T2 1871 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 DEPDC1BQ8WUY9 529 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 KLHL14Q9P2G3 628 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.05□□□□□ -0.482e-7■■■■□ 25.7
FN1-204ENST00000356005 RICTORQ6R327 1708 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 KIF3CO14782 793 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 IL18RAPO95256 599 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 DPEP1P16444 411 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 RFC5P40937 340 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 GBA2Q9HCG7 927 aaPredicted RBP12.05□□□□□ -0.48
FN1-204ENST00000356005 KLHL8Q9P2G9 620 aaPredicted RBP12.05□□□□□ -0.48
FN1-204ENST00000356005 KCNA4P22459 653 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 MSH2P43246 934 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 CDK17Q00537 523 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 NR1H3Q13133 447 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 NAALADL2Q58DX5 795 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 XKR3Q5GH77 459 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 UBE2Q2Q8WVN8 375 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 DPF3Q92784 378 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 FLT1P17948 1338 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 PHLPP1O60346 1717 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 ARHGAP25P42331 645 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 PI16Q6UXB8 463 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 HSPH1Q92598 858 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 KIF23Q02241 960 aaPredicted RBP12.05□□□□□ -0.48
FN1-204ENST00000356005 QRICH1Q2TAL8 776 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 DGAT1O75907 488 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 VAMP7P51809 220 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 STILQ15468 1287 aa12.05□□□□□ -0.48
FN1-204ENST00000356005 TAF1BQ53T94 588 aaPredicted RBP12.05□□□□□ -0.48
FN1-204ENST00000356005 EIF2AK1Q9BQI3 630 aaKnown RBP12.05□□□□□ -0.48
FN1-204ENST00000356005 EVI5O60447 810 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 CDO1Q16878 200 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 NOTUMQ6P988 496 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 LRRC8CQ8TDW0 803 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 LRGUKQ96M69 825 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 HBP1O60381 514 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 IGKV5-2P06315 115 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 CDC25BP30305 580 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 GTF2H3Q13889 308 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 TSNAXIP1Q2TAA8 658 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 EFHC2Q5JST6 749 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 ZNF512BQ96KM6 892 aaPredicted RBP12.04□□□□□ -0.48
FN1-204ENST00000356005 AGO2Q9UKV8 859 aaKnown RBP12.04□□□□□ -0.48
FN1-204ENST00000356005 MYBL1P10243 752 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 PCSK1P29120 753 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 FBXW4P57775 412 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 TFDP2Q14188 446 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 MAPRE1Q15691 268 aaKnown RBP12.04□□□□□ -0.48
FN1-204ENST00000356005 CEP120Q8N960 986 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 APPL2Q8NEU8 664 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 PDCD6IPQ8WUM4 868 aaKnown RBP12.04□□□□□ -0.48
FN1-204ENST00000356005 SH3BP1Q9Y3L3 701 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 NR2E3Q9Y5X4 410 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 NRXN1Q9ULB1 1477 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 ECEL1O95672 775 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 CYP2B6P20813 491 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 HSD17B4P51659 736 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 APBA1Q02410 837 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 BRD3Q15059 726 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 LONRF3Q496Y0 759 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 PLEKHA8P1O95397 391 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 BASP1P80723 227 aaKnown RBP12.04□□□□□ -0.48
FN1-204ENST00000356005 TMEM132BQ14DG7 1078 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 USP17L6PQ6QN14 398 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 SCG3Q8WXD2 468 aaKnown RBP12.04□□□□□ -0.48
FN1-204ENST00000356005 FAM213AQ9BRX8 229 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 ADAM22Q9P0K1 906 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 PI4K2BG5E9Z4 385 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 ITGA4P13612 1032 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 MEI1Q5TIA1 1274 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 ITPRIPL1Q6GPH6 555 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 ZNF34Q8IZ26 560 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 GPD1LQ8N335 351 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 DRC3Q9H069 523 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 DAAM1Q9Y4D1 1078 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 LTN1O94822 1766 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 CASZ1Q86V15 1759 aa12.04□□□□□ -0.48
FN1-204ENST00000356005 CCDC151A5D8V7 595 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 PGRMC1O00264 195 aaKnown RBP12.03□□□□□ -0.48
FN1-204ENST00000356005 GADD45BO75293 160 aaPredicted RBP12.03□□□□□ -0.48
FN1-204ENST00000356005 SERPINB6P35237 376 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 KNOP1Q1ED39 458 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms