RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 RFX8Q6ZV50 586 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 SCG3Q8WXD2 468 aaKnown RBP13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 ALKBH8Q96BT7 664 aaKnown RBP13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 HEMGNQ9BXL5 484 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 ZNF185O15231 689 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 IGBP1P78318 339 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 OR6B2Q6IFH4 312 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 POTEAQ6S8J7 498 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 ZBED8Q8IZ13 594 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 PPM1NQ8N819 430 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 SKA2Q8WVK7 121 aaPredicted RBP13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 RAPGEF5Q92565 580 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.53□□□□□ -0.242e-7■■■■□ 20.6
SYNCRIP-201ENST00000355238 FAM149B1Q96BN6 582 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 KCNK16Q96T55 309 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 CHCHD3Q9NX63 227 aaKnown RBP13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 IL1RAPL1Q9NZN1 696 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 TBX22Q9Y458 520 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 PLEKHG1Q9ULL1 1385 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 IGF2BP3O00425 579 aaKnown RBP eCLIP13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 FGFR4P22455 802 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 RAP1GDS1P52306 607 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 ACBD5Q5T8D3 534 aaPredicted RBP13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 IZUMO3Q5VZ72 239 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 PIK3R5Q8WYR1 880 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 ERP27Q96DN0 273 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 RNPC3Q96LT9 517 aaKnown RBP13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 FHOD1Q9Y613 1164 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 SERPINI2O75830 405 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 SMARCA1P28370 1054 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 SHC4Q6S5L8 630 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 VCPKMTQ9H867 229 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 ZWILCHQ9H900 591 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 C16orf96A6NNT2 1141 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 CASP1P29466 404 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 TRIM60Q495X7 471 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 MTBPQ96DY7 904 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 NUP85Q9BW27 656 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 BRIP1Q9BX63 1249 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 VPS11Q9H270 941 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 SASH1O94885 1247 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 MYBL1P10243 752 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 GFAPP14136 432 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 GUF1Q8N442 669 aaKnown RBP13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 FUT8Q9BYC5 575 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 GTSE1Q9NYZ3 720 aa13.53□□□□□ -0.24
SYNCRIP-201ENST00000355238 ASAP2O43150 1006 aa13.52□□□□□ -0.24
SYNCRIP-201ENST00000355238 NR3C1P04150 777 aa13.52□□□□□ -0.24
SYNCRIP-201ENST00000355238 GPS1Q13098 491 aa13.52□□□□□ -0.24
SYNCRIP-201ENST00000355238 MTA3Q9BTC8 594 aa13.52□□□□□ -0.24
SYNCRIP-201ENST00000355238 ABCA5Q8WWZ7 1642 aa13.52□□□□□ -0.24
SYNCRIP-201ENST00000355238 SSU72P8A0A1W2PR75 194 aa13.52□□□□□ -0.24
SYNCRIP-201ENST00000355238 ENO1P06733 434 aaKnown RBP13.52□□□□□ -0.24
SYNCRIP-201ENST00000355238 KCNB1Q14721 858 aa13.52□□□□□ -0.24
SYNCRIP-201ENST00000355238 GREM2Q9H772 168 aa13.52□□□□□ -0.24
SYNCRIP-201ENST00000355238 KIF9Q9HAQ2 790 aa13.52□□□□□ -0.24
SYNCRIP-201ENST00000355238 IVNS1ABPQ9Y6Y0 642 aa13.52□□□□□ -0.24
SYNCRIP-201ENST00000355238 CALB1P05937 261 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 PAPOLAP51003 745 aaKnown RBP13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 MTRQ99707 1265 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 TSSK1BQ9BXA7 367 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 SUGCTQ9HAC7 445 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 SEPT9Q9UHD8 586 aaPredicted RBP13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 NOD1Q9Y239 953 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 NPR1P16066 1061 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 KRT17Q04695 432 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 PTPN12Q05209 780 aaKnown RBP13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 ITIH4Q14624 930 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 LCORLQ8N3X6 602 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 SLC7A3Q8WY07 619 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 ZBTB10Q96DT7 871 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 NAF1Q96HR8 494 aaKnown RBP13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 ANKRD27Q96NW4 1050 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 RPS6KC1Q96S38 1066 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 GID8Q9NWU2 228 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 MTO1Q9Y2Z2 717 aaKnown RBP13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 FAM47DPA6NHR8 397 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 SNUPNO95149 360 aaKnown RBP13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 KDSRQ06136 332 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 NR1I3Q14994 352 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 HSPH1Q92598 858 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 RAD54LQ92698 747 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 CMTM5Q96DZ9 223 aa13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 TTC7AQ9ULT0 858 aaPredicted RBP13.52□□□□□ -0.25
SYNCRIP-201ENST00000355238 MAP3K10Q02779 954 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 INPP5AQ14642 412 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 TC2NQ8N9U0 490 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 GTPBP10A4D1E9 387 aaKnown RBP13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 GOLGA8MH3BSY2 632 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 SEC24CP53992 1094 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 PMS1P54277 932 aaKnown RBP13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 ADCK1Q86TW2 530 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 KIAA0556O60303 1618 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 HNRNPCL2B2RXH8 293 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 SKOR1P84550 965 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 WDR93Q6P2C0 686 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 RHOT1Q8IXI2 618 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 GJB4Q9NTQ9 266 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 ATP11BQ9Y2G3 1177 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms