RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 MB21D2Q8IYB1 491 aaPredicted RBP14.12□□□□□ -0.15
SCN8A-202ENST00000355133 LXNQ9BS40 222 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 EDEM3Q9BZQ6 932 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 PLAAQ9Y263 795 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 CUL1Q13616 776 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 ALS2CLQ60I27 953 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 ZNF746Q6NUN9 644 aaPredicted RBP14.12□□□□□ -0.15
SCN8A-202ENST00000355133 LRRC31Q6UY01 552 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 CCDC138Q96M89 665 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 ABHD10Q9NUJ1 306 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 TTC7AQ9ULT0 858 aaPredicted RBP14.12□□□□□ -0.15
SCN8A-202ENST00000355133 CDC42BPGQ6DT37 1551 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 KCNQ2O43526 872 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 CLCN6P51797 869 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 HDLBPQ00341 1268 aaKnown RBP14.12□□□□□ -0.15
SCN8A-202ENST00000355133 DRP2Q13474 957 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 CASP8Q14790 479 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 SLC10A5Q5PT55 438 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 FAM217BQ9NTX9 383 aaPredicted RBP14.12□□□□□ -0.15
SCN8A-202ENST00000355133 SLC13A4Q9UKG4 626 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 HPCAL4Q9UM19 191 aa14.12□□□□□ -0.15
SCN8A-202ENST00000355133 CDHR2Q9BYE9 1310 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 DPYSL4O14531 572 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 PPFIA2O75334 1257 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 TDP2O95551 362 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 CALB1P05937 261 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 ESRRAP11474 423 aaPredicted RBP14.11□□□□□ -0.15
SCN8A-202ENST00000355133 TRMT10CQ7L0Y3 403 aaKnown RBP14.11□□□□□ -0.15
SCN8A-202ENST00000355133 NUP85Q9BW27 656 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 INTS2Q9H0H0 1204 aaKnown RBP14.11□□□□□ -0.15
SCN8A-202ENST00000355133 XAB2Q9HCS7 855 aaKnown RBP14.11□□□□□ -0.15
SCN8A-202ENST00000355133 TXLNGQ9NUQ3 528 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 IPO5O00410 1097 aaKnown RBP14.11□□□□□ -0.15
SCN8A-202ENST00000355133 COPEO14579 308 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 APOEP02649 317 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 FCER1AP12319 257 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 NFKBIAP25963 317 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 SFNP31947 248 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 PAPOLAP51003 745 aaKnown RBP14.11□□□□□ -0.15
SCN8A-202ENST00000355133 EIF3BP55884 814 aaKnown RBP14.11□□□□□ -0.15
SCN8A-202ENST00000355133 ADCY2Q08462 1091 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 NME3Q13232 169 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 KIAA1755Q5JYT7 1200 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 SZRD1Q7Z422 152 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 PROM2Q8N271 834 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 ZNF579Q8NAF0 562 aaKnown RBP14.11□□□□□ -0.15
SCN8A-202ENST00000355133 ANLNQ9NQW6 1124 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 BARHL2Q9NY43 387 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 NEMP1O14524 444 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 LUC7L3O95232 432 aaKnown RBP14.11□□□□□ -0.15
SCN8A-202ENST00000355133 MOCS2O96007 188 aaPredicted RBP14.11□□□□□ -0.15
SCN8A-202ENST00000355133 ZNF211Q13398 564 aaPredicted RBP14.11□□□□□ -0.15
SCN8A-202ENST00000355133 SMAD1Q15797 465 aaKnown RBP14.11□□□□□ -0.15
SCN8A-202ENST00000355133 SMIM5Q71RC9 77 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 ACAD9Q9H845 621 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 NCAPD2Q15021 1401 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 KRT37O76014 449 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 TMPRSS15P98073 1019 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 MXD3Q9BW11 206 aa14.11□□□□□ -0.15
SCN8A-202ENST00000355133 GNA15P30679 374 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 TFDP2Q14188 446 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 RPAP3Q9H6T3 665 aaPredicted RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 SARS2Q9NP81 518 aaKnown RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 DIS3Q9Y2L1 958 aaKnown RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 SNX2O60749 519 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 AKR1B1P15121 316 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 EEF1B2P24534 225 aaKnown RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 SDC4P31431 198 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 PSMC1P62191 440 aaKnown RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 NUGGCQ68CJ6 796 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 PRPF38AQ8NAV1 312 aaKnown RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 ZNF564Q8TBZ8 553 aaPredicted RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 A0A0G2JND7 137 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 CCDC151A5D8V7 595 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 GSG1L2A8MUP6 293 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 PODXLO00592 558 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 ESRRBO95718 433 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 HSPA8P11142 646 aaKnown RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 CRLF3Q8IUI8 442 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 SRRM1Q8IYB3 904 aaKnown RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 C2orf40Q9H1Z8 148 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 CPSF1Q10570 1443 aaKnown RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 PSMC5P62195 406 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 EIF2AK1Q9BQI3 630 aaKnown RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 TRAIPQ9BWF2 469 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 MRPL4Q9BYD3 311 aaKnown RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 VPS11Q9H270 941 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 TSR3Q9UJK0 312 aaKnown RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 STRIP2Q9ULQ0 834 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 SYNGAP1Q96PV0 1343 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 PVALEFA0A1B0GWK0 134 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 DRAP1Q14919 205 aaPredicted RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 HIPK4Q8NE63 616 aa14.1□□□□□ -0.15
SCN8A-202ENST00000355133 RRP15Q9Y3B9 282 aaKnown RBP14.1□□□□□ -0.15
SCN8A-202ENST00000355133 ADRA2BP18089 450 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 PEX19P40855 299 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 STAG2Q8N3U4 1231 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 TUBB6Q9BUF5 446 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 GCOM2Q9BZD3 368 aaPredicted RBP14.09□□□□□ -0.15
SCN8A-202ENST00000355133 MIF4GDA9UHW6 222 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms