RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 PPP3CAQ08209 521 aa16.96■□□□□ 0.3
MBD1-205ENST00000353909 PHLDB3Q6NSJ2 640 aa16.96■□□□□ 0.3
MBD1-205ENST00000353909 ALKBH5Q6P6C2 394 aaKnown RBP16.96■□□□□ 0.3
MBD1-205ENST00000353909 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.96■□□□□ 0.3
MBD1-205ENST00000353909 SLC9A9Q8IVB4 645 aa16.96■□□□□ 0.3
MBD1-205ENST00000353909 SMAP1Q8IYB5 467 aaPredicted RBP16.96■□□□□ 0.3
MBD1-205ENST00000353909 RNF10Q8N5U6 811 aaKnown RBP16.96■□□□□ 0.3
MBD1-205ENST00000353909 BSNDQ8WZ55 320 aa16.96■□□□□ 0.3
MBD1-205ENST00000353909 TEX13BQ9BXU2 312 aa16.96■□□□□ 0.3
MBD1-205ENST00000353909 FBXL5Q9UKA1 691 aa16.96■□□□□ 0.3
MBD1-205ENST00000353909 L1RE1Q9UN81 338 aa16.96■□□□□ 0.3
MBD1-205ENST00000353909 C19orf81C9J6K1 198 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 F8VZ95 297 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 DDX3XO00571 662 aaKnown RBP eCLIP16.95■□□□□ 0.32e-8■■■■□ 25.7
MBD1-205ENST00000353909 PRKCIP41743 596 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 SP2Q02086 613 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 DRAP1Q14919 205 aaPredicted RBP16.95■□□□□ 0.3
MBD1-205ENST00000353909 TREML2Q5T2D2 321 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 CCDC125Q86Z20 511 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.95■□□□□ 0.3
MBD1-205ENST00000353909 NSUN6Q8TEA1 469 aaKnown RBP16.95■□□□□ 0.3
MBD1-205ENST00000353909 FBXO41Q8TF61 875 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 HNRNPLLQ8WVV9 542 aaKnown RBP16.95■□□□□ 0.3
MBD1-205ENST00000353909 INTS2Q9H0H0 1204 aaKnown RBP16.95■□□□□ 0.3
MBD1-205ENST00000353909 PCDHA10Q9Y5I2 948 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 POTEB2H3BUK9 544 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 CKAP4Q07065 602 aaKnown RBP16.95■□□□□ 0.3
MBD1-205ENST00000353909 ARHGAP44Q17R89 818 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 C1orf220Q5T0J3 134 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 SWSAP1Q6NVH7 229 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 GSPT2Q8IYD1 628 aaKnown RBP16.95■□□□□ 0.3
MBD1-205ENST00000353909 GPC2Q8N158 579 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 SAMD3Q8N6K7 520 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 LMO3Q8TAP4 145 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 ZNF526Q8TF50 670 aaPredicted RBP16.95■□□□□ 0.3
MBD1-205ENST00000353909 GDAP1L1Q96MZ0 367 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 HYOU1Q9Y4L1 999 aa16.95■□□□□ 0.3
MBD1-205ENST00000353909 GRID2IPA4D2P6 1211 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 CCDC169A6NNP5 214 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 ANKRD63C9JTQ0 380 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 MAP2K7O14733 419 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 MYBL2P10244 700 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 ADSSP30520 456 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 SFNP31947 248 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 GCLMP48507 274 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 GTF2BQ00403 316 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 MYL7Q01449 175 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 CNTN2Q02246 1040 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 VGLL4Q14135 290 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 CCDC60Q8IWA6 550 aaPredicted RBP16.94■□□□□ 0.3
MBD1-205ENST00000353909 SPATA4Q8NEY3 305 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 ACCSQ96QU6 501 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 HSPBP1Q9NZL4 362 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 TMOD4Q9NZQ9 345 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 EMSYQ7Z589 1322 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 STBD1O95210 358 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 NPTX2P47972 431 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 PPP2R5AQ15172 486 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 GLYCTKQ8IVS8 523 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 GOLGA5Q8TBA6 731 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 LNX1Q8TBB1 728 aaPredicted RBP16.94■□□□□ 0.3
MBD1-205ENST00000353909 GPRASP2Q96D09 838 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 R3HDMLQ9H3Y0 253 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 TMEM206Q9H813 350 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 ACAD9Q9H845 621 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 PFASO15067 1338 aa16.94■□□□□ 0.3
MBD1-205ENST00000353909 POLR3GO15318 223 aaPredicted RBP16.93■□□□□ 0.3
MBD1-205ENST00000353909 PRLRP16471 622 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 TUBB4BP68371 445 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 WDR93Q6P2C0 686 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 PALB2Q86YC2 1186 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 ELMO3Q96BJ8 720 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 CEP170P1Q96L14 293 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 UBXN6Q9BZV1 441 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 PCDHGC5Q9Y5F6 944 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 SNCAIPQ9Y6H5 919 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 LCTP09848 1927 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 TMCO5BA8MYB1 307 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 ADRB2P07550 413 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 SOX5P35711 763 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 OAZ1P54368 228 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 NCKAP1LP55160 1127 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 RNASE9P60153 205 aaKnown RBP16.93■□□□□ 0.3
MBD1-205ENST00000353909 SMC1AQ14683 1233 aaKnown RBP16.93■□□□□ 0.3
MBD1-205ENST00000353909 ZNF746Q6NUN9 644 aaPredicted RBP16.93■□□□□ 0.3
MBD1-205ENST00000353909 CBWD2Q8IUF1 395 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 TMEM161BQ8NDZ6 487 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 SAAL1Q96ER3 474 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 FAM84AQ96KN4 292 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 LRRC1Q9BTT6 524 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 LUC7LQ9NQ29 371 aaKnown RBP16.93■□□□□ 0.3
MBD1-205ENST00000353909 APEX2Q9UBZ4 518 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 DMGDHQ9UI17 866 aaKnown RBP16.93■□□□□ 0.3
MBD1-205ENST00000353909 NENFQ9UMX5 172 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 USP20Q9Y2K6 914 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 BZW2Q9Y6E2 419 aaKnown RBP16.93■□□□□ 0.3
MBD1-205ENST00000353909 ADGRA3Q8IWK6 1321 aa16.93■□□□□ 0.3
MBD1-205ENST00000353909 ADM5C9JUS6 153 aa16.92■□□□□ 0.3
MBD1-205ENST00000353909 ATP8B1O43520 1251 aa16.92■□□□□ 0.3
MBD1-205ENST00000353909 TCP1P17987 556 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms