RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 DAAM1Q9Y4D1 1078 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 ASB3Q9Y575 518 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 TNS1Q9HBL0 1735 aaKnown RBP16.15■□□□□ 0.18
TRAF3-202ENST00000351691 IRF6O14896 467 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 PDE6BP35913 854 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 BTDP43251 543 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 NAPAP54920 295 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 DR1Q01658 176 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 SOGA3Q5TF21 947 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 RNF43Q68DV7 783 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 MTHFD1LQ6UB35 978 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 ZNF571Q7Z3V5 609 aaPredicted RBP16.15■□□□□ 0.18
TRAF3-202ENST00000351691 MAPKAPK5Q8IW41 473 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 LARP4BQ92615 738 aaKnown RBP16.15■□□□□ 0.18
TRAF3-202ENST00000351691 CELF4Q9BZC1 486 aaKnown RBP16.15■□□□□ 0.18
TRAF3-202ENST00000351691 CD209Q9NNX6 404 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 RASAL2Q9UJF2 1139 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 STX8Q9UNK0 236 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.15■□□□□ 0.18
TRAF3-202ENST00000351691 GFPT2O94808 682 aa16.14■□□□□ 0.17
TRAF3-202ENST00000351691 ATP6V1C1P21283 382 aa16.14■□□□□ 0.17
TRAF3-202ENST00000351691 IFI35P80217 286 aaPredicted RBP16.14■□□□□ 0.17
TRAF3-202ENST00000351691 PTK2Q05397 1052 aa16.14■□□□□ 0.17
TRAF3-202ENST00000351691 ACVR2BQ13705 512 aa16.14■□□□□ 0.17
TRAF3-202ENST00000351691 ALKBH5Q6P6C2 394 aaKnown RBP16.14■□□□□ 0.17
TRAF3-202ENST00000351691 DRAXINQ8NBI3 349 aaPredicted RBP16.14■□□□□ 0.17
TRAF3-202ENST00000351691 RPGRQ92834 1020 aaKnown RBP16.14■□□□□ 0.17
TRAF3-202ENST00000351691 MTFR1LQ9H019 292 aa16.14■□□□□ 0.17
TRAF3-202ENST00000351691 AMFRQ9UKV5 643 aa16.14■□□□□ 0.17
TRAF3-202ENST00000351691 GRIK5Q16478 980 aa16.14■□□□□ 0.17
TRAF3-202ENST00000351691 KIAA1755Q5JYT7 1200 aa16.14■□□□□ 0.17
TRAF3-202ENST00000351691 NEK8Q86SG6 692 aa16.14■□□□□ 0.17
TRAF3-202ENST00000351691 DAAM2Q86T65 1068 aa16.14■□□□□ 0.17
TRAF3-202ENST00000351691 FBF1Q8TES7 1133 aa16.14■□□□□ 0.17
TRAF3-202ENST00000351691 TRIM51Q9BSJ1 452 aa16.14■□□□□ 0.17
TRAF3-202ENST00000351691 RNPEPL1Q9HAU8 725 aa16.14■□□□□ 0.17
TRAF3-202ENST00000351691 SEC63Q9UGP8 760 aaKnown RBP16.14■□□□□ 0.17
TRAF3-202ENST00000351691 GAKO14976 1311 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 DPPA5A6NC42 116 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 SMCO2A6NFE2 343 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 H2AFZP0C0S5 128 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 CALB2P22676 271 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 RXRBP28702 533 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 FXR2P51116 673 aaKnown RBP eCLIP16.13■□□□□ 0.17
TRAF3-202ENST00000351691 GPSM2P81274 684 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 SLC4A8Q2Y0W8 1093 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 ANO7Q6IWH7 933 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 POTEAQ6S8J7 498 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 ZDHHC24Q6UX98 284 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 H2AFVQ71UI9 128 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 SPATA21Q7Z572 469 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 PROCA1Q8NCQ7 364 aaPredicted RBP16.13■□□□□ 0.17
TRAF3-202ENST00000351691 SLC44A5Q8NCS7 719 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 RAD54LQ92698 747 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 RBM17Q96I25 401 aaKnown RBP16.13■□□□□ 0.17
TRAF3-202ENST00000351691 PNMA5Q96PV4 448 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 SAP30BPQ9UHR5 308 aaKnown RBP16.13■□□□□ 0.17
TRAF3-202ENST00000351691 GGA1Q9UJY5 639 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 RPL26L1Q9UNX3 145 aaKnown RBP16.13■□□□□ 0.17
TRAF3-202ENST00000351691 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.13■□□□□ 0.17
TRAF3-202ENST00000351691 RPTORQ8N122 1335 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 PLIN4Q96Q06 1357 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 SPDYE3A6NKU9 549 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 A8MUI8 341 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 TRAF5O00463 557 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 KIAA0391O15091 583 aaKnown RBP16.13■□□□□ 0.17
TRAF3-202ENST00000351691 SMIM24O75264 130 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 GNAT1P11488 350 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 ACADSP16219 412 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 CDC25CP30307 473 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 TECP42680 631 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 SLC29A2Q14542 456 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 CHADLQ6NUI6 762 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 VPS36Q86VN1 386 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 DHX37Q8IY37 1157 aaKnown RBP16.13■□□□□ 0.17
TRAF3-202ENST00000351691 ENDOVQ8N8Q3 282 aaKnown RBP16.13■□□□□ 0.17
TRAF3-202ENST00000351691 GRAMD1AQ96CP6 724 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 CARD9Q9H257 536 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 TXLNGQ9NUQ3 528 aa16.13■□□□□ 0.17
TRAF3-202ENST00000351691 MTRF1LQ9UGC7 380 aaKnown RBP16.13■□□□□ 0.17
TRAF3-202ENST00000351691 TLDC2A0PJX2 215 aa16.12■□□□□ 0.17
TRAF3-202ENST00000351691 BBOX1O75936 387 aa16.12■□□□□ 0.17
TRAF3-202ENST00000351691 FGGP02679 453 aa16.12■□□□□ 0.17
TRAF3-202ENST00000351691 HSPA6P17066 643 aa16.12■□□□□ 0.17
TRAF3-202ENST00000351691 AUHQ13825 339 aaKnown RBP16.12■□□□□ 0.17
TRAF3-202ENST00000351691 CRY2Q49AN0 593 aa16.12■□□□□ 0.17
TRAF3-202ENST00000351691 DPY19L2P1Q6NXN4 242 aa16.12■□□□□ 0.17
TRAF3-202ENST00000351691 AGGF1Q8N302 714 aaeCLIP16.12■□□□□ 0.17
TRAF3-202ENST00000351691 RUNDC3BQ96NL0 473 aa16.12■□□□□ 0.17
TRAF3-202ENST00000351691 TMEM237Q96Q45 408 aa16.12■□□□□ 0.17
TRAF3-202ENST00000351691 RIOX1Q9H6W3 641 aa16.12■□□□□ 0.17
TRAF3-202ENST00000351691 STK38LQ9Y2H1 464 aa16.12■□□□□ 0.17
TRAF3-202ENST00000351691 NCANO14594 1321 aa16.12■□□□□ 0.17
TRAF3-202ENST00000351691 POTEFA5A3E0 1075 aa16.11■□□□□ 0.17
TRAF3-202ENST00000351691 RASGRF2O14827 1237 aa16.11■□□□□ 0.17
TRAF3-202ENST00000351691 CCNT1O60563 726 aaKnown RBP16.11■□□□□ 0.17
TRAF3-202ENST00000351691 UFL1O94874 794 aa16.11■□□□□ 0.17
TRAF3-202ENST00000351691 UNC5CO95185 931 aa16.11■□□□□ 0.17
TRAF3-202ENST00000351691 POTEIP0CG38 1075 aa16.11■□□□□ 0.17
TRAF3-202ENST00000351691 POTEJP0CG39 1038 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms