RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 LAMC2Q13753 1193 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 FBXO38Q6PIJ6 1188 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 RPUSD2Q8IZ73 545 aaKnown RBP13.11□□□□□ -0.31
SMAD9-201ENST00000350148 ACRBPQ8NEB7 543 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 ERGIC2Q96RQ1 377 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 USTQ9Y2C2 406 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.11□□□□□ -0.31
SMAD9-201ENST00000350148 LTBP4Q8N2S1 1624 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 GGPS1O95749 300 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 CIITAP33076 1130 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 PPATQ06203 517 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 NBPF12Q5TAG4 269 aaPredicted RBP13.11□□□□□ -0.31
SMAD9-201ENST00000350148 METTL23Q86XA0 190 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 GCOM2Q9BZD3 368 aaPredicted RBP13.11□□□□□ -0.31
SMAD9-201ENST00000350148 STIM2Q9P246 746 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 CYP3A7-CYP3A51PA0A087WV96 503 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 CYP3A7P24462 503 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 GRIN1Q05586 938 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 IER5Q5VY09 327 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 CCDC117Q8IWD4 279 aaPredicted RBP13.1□□□□□ -0.31
SMAD9-201ENST00000350148 PROCA1Q8NCQ7 364 aaPredicted RBP13.1□□□□□ -0.31
SMAD9-201ENST00000350148 FAM76AQ8TAV0 307 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 PLEKHA4Q9H4M7 779 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 ZFYVE28Q9HCC9 887 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 SNHG28P0DPA3 235 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 MYBL1P10243 752 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 SLC26A2P50443 739 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 SREBF2Q12772 1141 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 NLRP4Q96MN2 994 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 FAM193BQ96PV7 902 aaPredicted RBP13.1□□□□□ -0.31
SMAD9-201ENST00000350148 IGSF9BQ9UPX0 1349 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 TTC26A0AVF1 554 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 LRRC53A6NM62 1247 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 HBP1O60381 514 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 SARSP49591 514 aaKnown RBP13.1□□□□□ -0.31
SMAD9-201ENST00000350148 GPC3P51654 580 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 CCDC144BQ3MJ40 725 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 ZNF667Q5HYK9 610 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 CATSPER4Q7RTX7 472 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 CCDC97Q96F63 343 aaPredicted RBP13.1□□□□□ -0.31
SMAD9-201ENST00000350148 SNX25Q9H3E2 840 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 ASIC3Q9UHC3 531 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 ADGRG1Q9Y653 693 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 PGRMC1O00264 195 aaKnown RBP13.1□□□□□ -0.31
SMAD9-201ENST00000350148 TEX33O43247 280 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 CYTH3O43739 400 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 TMEM119Q4V9L6 283 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 KLHL7Q8IXQ5 586 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 IQCGQ9H095 443 aaKnown RBP13.1□□□□□ -0.31
SMAD9-201ENST00000350148 UNC45AQ9H3U1 944 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 CCL15-CCL14A0A0B4J2E2 113 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 WTIPA6NIX2 430 aaPredicted RBP13.1□□□□□ -0.31
SMAD9-201ENST00000350148 PPFIA1Q13136 1202 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 CCL15Q16663 113 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 C4orf19Q8IY42 314 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 SYTL5Q8TDW5 730 aaPredicted RBP13.1□□□□□ -0.31
SMAD9-201ENST00000350148 CFAP57Q96MR6 1250 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 EFCC1Q9HA90 598 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 PXMP2Q9NR77 195 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 FAM114A2Q9NRY5 505 aa13.1□□□□□ -0.31
SMAD9-201ENST00000350148 ATP2C2O75185 946 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 TGFB3P10600 412 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 GUCY2CP25092 1073 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 MARK3P27448 753 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 MAPK4P31152 587 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 POTEAQ6S8J7 498 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 FBXO28Q9NVF7 368 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 GPRC5DQ9NZD1 345 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 AGO2Q9UKV8 859 aaKnown RBP13.09□□□□□ -0.31
SMAD9-201ENST00000350148 STRCQ7RTU9 1775 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 DAPK3O43293 454 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 GOLGA8FQ08AF8 430 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 GOLGA8DPQ0D2H9 430 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 FUT2Q10981 343 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 PPP2R5CQ13362 524 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 ZNF568Q3ZCX4 644 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 GLE1Q53GS7 698 aaKnown RBP13.09□□□□□ -0.31
SMAD9-201ENST00000350148 FIGNQ5HY92 759 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 SND1Q7KZF4 910 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMAD9-201ENST00000350148 UBLCP1Q8WVY7 318 aaPredicted RBP13.09□□□□□ -0.31
SMAD9-201ENST00000350148 SLC5A5Q92911 643 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 ZKSCAN4Q969J2 545 aaPredicted RBP13.09□□□□□ -0.31
SMAD9-201ENST00000350148 UBE2Q2LH0YL09 131 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 MYL3P08590 195 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 ZBTB33Q86T24 672 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 CCHCR1Q8TD31 782 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 RNF34Q969K3 372 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 MED10Q9BTT4 135 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 GOLGA8IPA6NC78 632 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 RRN3P2A6NIE6 340 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 GOLGA8JA6NMD2 632 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 RPLP2P05387 115 aaKnown RBP13.09□□□□□ -0.31
SMAD9-201ENST00000350148 PRKCEQ02156 737 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 PPARDQ03181 441 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 EMC2Q15006 297 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 FBXL13Q8NEE6 735 aa13.09□□□□□ -0.31
SMAD9-201ENST00000350148 ZC3H15Q8WU90 426 aaKnown RBP13.09□□□□□ -0.31
SMAD9-201ENST00000350148 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
SMAD9-201ENST00000350148 CCDC188H7C350 402 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms