RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 IFNLR1Q8IU57 520 aaPredicted RBP24.57■■□□□ 1.52
SNX3-202ENST00000349379 KCTD17Q8N5Z5 321 aa24.57■■□□□ 1.52
SNX3-202ENST00000349379 MCPH1Q8NEM0 835 aa24.57■■□□□ 1.52
SNX3-202ENST00000349379 ZNF689Q96CS4 500 aaPredicted RBP24.57■■□□□ 1.52
SNX3-202ENST00000349379 DENND3A2RUS2 1198 aa24.56■■□□□ 1.52
SNX3-202ENST00000349379 ARHGEF35A5YM69 484 aa24.56■■□□□ 1.52
SNX3-202ENST00000349379 DGKIO75912 1065 aa24.56■■□□□ 1.52
SNX3-202ENST00000349379 CYP11B2P19099 503 aa24.56■■□□□ 1.52
SNX3-202ENST00000349379 SFPQP23246 707 aaKnown RBP eCLIP24.56■■□□□ 1.52
SNX3-202ENST00000349379 GLRA2P23416 452 aa24.56■■□□□ 1.52
SNX3-202ENST00000349379 GRIN1Q05586 938 aa24.56■■□□□ 1.52
SNX3-202ENST00000349379 PADI6Q6TGC4 694 aa24.56■■□□□ 1.52
SNX3-202ENST00000349379 ASAP3Q8TDY4 903 aa24.56■■□□□ 1.52
SNX3-202ENST00000349379 PNMA5Q96PV4 448 aa24.56■■□□□ 1.52
SNX3-202ENST00000349379 YME1L1Q96TA2 773 aa24.56■■□□□ 1.52
SNX3-202ENST00000349379 BHMT2Q9H2M3 363 aa24.56■■□□□ 1.52
SNX3-202ENST00000349379 SLC26A4O43511 780 aa24.55■■□□□ 1.52
SNX3-202ENST00000349379 EYA4O95677 639 aa24.55■■□□□ 1.52
SNX3-202ENST00000349379 SRGAP2CP0DJJ0 459 aa24.55■■□□□ 1.52
SNX3-202ENST00000349379 CAPSQ13938 189 aa24.55■■□□□ 1.52
SNX3-202ENST00000349379 KCNK18Q7Z418 384 aa24.55■■□□□ 1.52
SNX3-202ENST00000349379 RNF149Q8NC42 400 aa24.55■■□□□ 1.52
SNX3-202ENST00000349379 MYLIPQ8WY64 445 aa24.55■■□□□ 1.52
SNX3-202ENST00000349379 USP28Q96RU2 1077 aa24.55■■□□□ 1.52
SNX3-202ENST00000349379 NFKBIZQ9BYH8 718 aa24.55■■□□□ 1.52
SNX3-202ENST00000349379 POLR3FQ9H1D9 316 aaPredicted RBP24.55■■□□□ 1.52
SNX3-202ENST00000349379 PRDM12Q9H4Q4 367 aa24.55■■□□□ 1.52
SNX3-202ENST00000349379 MINDY3Q9H8M7 445 aa24.55■■□□□ 1.52
SNX3-202ENST00000349379 GPRC5CQ9NQ84 441 aa24.55■■□□□ 1.52
SNX3-202ENST00000349379 CHST12Q9NRB3 414 aa24.55■■□□□ 1.52
SNX3-202ENST00000349379 E9PMD0 336 aa24.54■■□□□ 1.52
SNX3-202ENST00000349379 STAG3L1P0CL83 205 aa24.54■■□□□ 1.52
SNX3-202ENST00000349379 LONP1P36776 959 aaKnown RBP24.54■■□□□ 1.52
SNX3-202ENST00000349379 PTENP60484 403 aa24.54■■□□□ 1.52
SNX3-202ENST00000349379 ERVK-21P61565 698 aa24.54■■□□□ 1.52
SNX3-202ENST00000349379 GRB10Q13322 594 aa24.54■■□□□ 1.52
SNX3-202ENST00000349379 TMEM119Q4V9L6 283 aa24.54■■□□□ 1.52
SNX3-202ENST00000349379 TRAIPQ9BWF2 469 aa24.54■■□□□ 1.52
SNX3-202ENST00000349379 ELAC1Q9H777 363 aaKnown RBP24.54■■□□□ 1.52
SNX3-202ENST00000349379 DNM3Q9UQ16 869 aa24.54■■□□□ 1.52
SNX3-202ENST00000349379 ADGRA3Q8IWK6 1321 aa24.54■■□□□ 1.52
SNX3-202ENST00000349379 EPOPA6NHQ4 379 aa24.53■■□□□ 1.52
SNX3-202ENST00000349379 LINC00271P0C7V0 271 aa24.53■■□□□ 1.52
SNX3-202ENST00000349379 ZSCAN22P10073 491 aaPredicted RBP24.53■■□□□ 1.52
SNX3-202ENST00000349379 ZSCAN20P17040 1043 aaPredicted RBP24.53■■□□□ 1.52
SNX3-202ENST00000349379 PHKA2P46019 1235 aa24.53■■□□□ 1.52
SNX3-202ENST00000349379 TGS1Q96RS0 853 aaKnown RBP24.53■■□□□ 1.52
SNX3-202ENST00000349379 NT5C3AQ9H0P0 336 aa24.53■■□□□ 1.52
SNX3-202ENST00000349379 AGPAT5Q9NUQ2 364 aa24.53■■□□□ 1.52
SNX3-202ENST00000349379 FBXO2Q9UK22 296 aaPredicted RBP24.53■■□□□ 1.52
SNX3-202ENST00000349379 ATG2AQ2TAZ0 1938 aa24.53■■□□□ 1.52
SNX3-202ENST00000349379 NASPP49321 788 aaPredicted RBP24.52■■□□□ 1.52
SNX3-202ENST00000349379 PKP1Q13835 747 aa24.52■■□□□ 1.52
SNX3-202ENST00000349379 TFDP1Q14186 410 aa24.52■■□□□ 1.52
SNX3-202ENST00000349379 ADGRE1Q14246 886 aa24.52■■□□□ 1.52
SNX3-202ENST00000349379 PCBP1Q15365 356 aaKnown RBP eCLIP24.52■■□□□ 1.52
SNX3-202ENST00000349379 MAEAQ7L5Y9 396 aa24.52■■□□□ 1.52
SNX3-202ENST00000349379 CATSPER4Q7RTX7 472 aa24.52■■□□□ 1.52
SNX3-202ENST00000349379 CABP7Q86V35 215 aa24.52■■□□□ 1.52
SNX3-202ENST00000349379 SPRYD3Q8NCJ5 442 aa24.52■■□□□ 1.52
SNX3-202ENST00000349379 RNF216Q9NWF9 866 aaPredicted RBP24.52■■□□□ 1.52
SNX3-202ENST00000349379 TMEM161AQ9NX61 479 aa24.52■■□□□ 1.52
SNX3-202ENST00000349379 DACT1Q9NYF0 836 aa24.52■■□□□ 1.52
SNX3-202ENST00000349379 SRPRBQ9Y5M8 271 aaKnown RBP24.52■■□□□ 1.52
SNX3-202ENST00000349379 TCHHQ07283 1943 aa24.51■■□□□ 1.51
SNX3-202ENST00000349379 F13A1P00488 732 aa24.51■■□□□ 1.51
SNX3-202ENST00000349379 SLC39A14Q15043 492 aa24.51■■□□□ 1.51
SNX3-202ENST00000349379 CMTR2Q8IYT2 770 aaKnown RBP24.51■■□□□ 1.51
SNX3-202ENST00000349379 CERS4Q9HA82 394 aa24.51■■□□□ 1.51
SNX3-202ENST00000349379 PCDHB7Q9Y5E2 793 aa24.51■■□□□ 1.51
SNX3-202ENST00000349379 A0A0U1RQF3 1178 aa24.5■■□□□ 1.51
SNX3-202ENST00000349379 MARCKSP29966 332 aaPredicted RBP24.5■■□□□ 1.51
SNX3-202ENST00000349379 MBTD1Q05BQ5 628 aa24.5■■□□□ 1.51
SNX3-202ENST00000349379 FAM102BQ5T8I3 360 aa24.5■■□□□ 1.51
SNX3-202ENST00000349379 CDCA2Q69YH5 1023 aaPredicted RBP24.5■■□□□ 1.51
SNX3-202ENST00000349379 ZNF598Q86UK7 904 aaKnown RBP24.5■■□□□ 1.51
SNX3-202ENST00000349379 ECHDC2Q86YB7 292 aa24.5■■□□□ 1.51
SNX3-202ENST00000349379 ARNTL2Q8WYA1 636 aa24.5■■□□□ 1.51
SNX3-202ENST00000349379 BSNDQ8WZ55 320 aa24.5■■□□□ 1.51
SNX3-202ENST00000349379 SAMD11Q96NU1 681 aa24.5■■□□□ 1.51
SNX3-202ENST00000349379 CCSER1Q9C0I3 900 aa24.5■■□□□ 1.51
SNX3-202ENST00000349379 RNF19AQ9NV58 838 aa24.5■■□□□ 1.51
SNX3-202ENST00000349379 LRFN2Q9ULH4 789 aa24.5■■□□□ 1.51
SNX3-202ENST00000349379 PIN4Q9Y237 131 aaKnown RBP24.5■■□□□ 1.51
SNX3-202ENST00000349379 TRANK1O15050 2925 aa24.49■■□□□ 1.51
SNX3-202ENST00000349379 PRRC2BQ5JSZ5 2229 aaKnown RBP24.49■■□□□ 1.51
SNX3-202ENST00000349379 FOSL2P15408 326 aa24.49■■□□□ 1.51
SNX3-202ENST00000349379 ATF7P17544 494 aaPredicted RBP24.49■■□□□ 1.51
SNX3-202ENST00000349379 HOXA11P31270 313 aaPredicted RBP24.49■■□□□ 1.51
SNX3-202ENST00000349379 UBA7P41226 1012 aa24.49■■□□□ 1.51
SNX3-202ENST00000349379 GATMP50440 423 aa24.49■■□□□ 1.51
SNX3-202ENST00000349379 CEBPZQ03701 1054 aaKnown RBP24.49■■□□□ 1.51
SNX3-202ENST00000349379 AMHR2Q16671 573 aa24.49■■□□□ 1.51
SNX3-202ENST00000349379 RINT1Q6NUQ1 792 aa24.49■■□□□ 1.51
SNX3-202ENST00000349379 C1orf186Q6ZWK4 172 aa24.49■■□□□ 1.51
SNX3-202ENST00000349379 FIBCD1Q8N539 461 aa24.49■■□□□ 1.51
SNX3-202ENST00000349379 SYT2Q8N9I0 419 aaPredicted RBP24.49■■□□□ 1.51
SNX3-202ENST00000349379 LRRC15Q8TF66 581 aa24.49■■□□□ 1.51
SNX3-202ENST00000349379 CLP1Q92989 425 aaKnown RBP24.49■■□□□ 1.51
SNX3-202ENST00000349379 GAS2L1Q99501 681 aaPredicted RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms