RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 LRIG3Q6UXM1 1119 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 CPNE8Q86YQ8 564 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 SYCE1Q8N0S2 351 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 CTNNBL1Q8WYA6 563 aaPredicted RBP19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 RFFLQ8WZ73 363 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 MAGOHBQ96A72 148 aaKnown RBP19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 SLC12A6Q9UHW9 1150 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 LY75O60449 1722 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 TMEM110-MUSTN1A8MSY1 372 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 GAP43P17677 238 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 MARCKSL1P49006 195 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 LLGL1Q15334 1064 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 ICE2Q659A1 982 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 MSL1Q68DK7 614 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 KCNV1Q6PIU1 500 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 PODNQ7Z5L7 613 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 CCDC26Q8TAB7 109 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 UNC45AQ9H3U1 944 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 A6NNZ2 444 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 EXOC3O60645 756 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 GAS7O60861 476 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 SHBGP04278 402 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 HNRNPH1P31943 449 aaKnown RBP19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 MKRN4PQ13434 485 aaPredicted RBP19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 TUBB8Q3ZCM7 444 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 KRT35Q92764 455 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 KAT5Q92993 513 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 ELMO3Q96BJ8 720 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 DMAC2Q9NW81 257 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 INTUQ9ULD6 942 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 UTP11Q9Y3A2 253 aaKnown RBP19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 C10orf71Q711Q0 1435 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 LTBP1Q14766 1721 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 TMEM253P0C7T8 217 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 KRT71Q3SY84 523 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 CSRNP1Q96S65 589 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 SLITRK6Q9H5Y7 841 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 APEX2Q9UBZ4 518 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 FRMD4BQ9Y2L6 1034 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 SNX24Q9Y343 169 aa19.61■□□□□ 0.73
PTP4A3-202ENST00000349124 EIF3DO15371 548 aaKnown RBP eCLIP19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 FAM107AO95990 144 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 LMNB1P20700 586 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 FNTAP49354 379 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 NPEPPSP55786 919 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 SPRED3Q2MJR0 410 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 HS2ST1Q7LGA3 356 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 ZDHHC14Q8IZN3 488 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 SYCP3Q8IZU3 236 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 DAW1Q8N136 415 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 C1orf131Q8NDD1 294 aaKnown RBP19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 UHMK1Q8TAS1 419 aaKnown RBP19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 UBE2TQ9NPD8 197 aaPredicted RBP19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 GREB1LQ9C091 1923 aaPredicted RBP19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 PPP1R12BO60237 982 aaPredicted RBP19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 ECE2O60344 883 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 KIAA0754O94854 1291 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 GUCY2CP25092 1073 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 ARHGEF19Q8IW93 802 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 EIF1ADQ8N9N8 165 aaKnown RBP19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 LMO3Q8TAP4 145 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 CYFIP2Q96F07 1278 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 ALG6Q9Y672 507 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 CLSTN1O94985 981 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 PLTPP55058 493 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 MYL7Q01449 175 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 BTNL9Q6UXG8 535 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 COL23A1Q86Y22 540 aaPredicted RBP19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.6■□□□□ 0.733e-7■■■■□ 23.4
PTP4A3-202ENST00000349124 GOPCQ9HD26 462 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 TUFT1Q9NNX1 390 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 FBXO28Q9NVF7 368 aa19.6■□□□□ 0.73
PTP4A3-202ENST00000349124 TCP10L2B9ZVM9 353 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 HIP1RO75146 1068 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 USP8P40818 1118 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 PRELPP51888 382 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 STAT2P52630 851 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 SLC15A2Q16348 729 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 SEC14L1Q92503 715 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 C18orf8Q96DM3 657 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 ZNF577Q9BSK1 485 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 ATAD5Q96QE3 1844 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 GMNCA6NCL1 334 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 SMIM23A6NLE4 172 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 PHF20L1A8MW92 1017 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 ATMINO43313 823 aaPredicted RBP19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 CAND2O75155 1236 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 FTLP02792 175 aaPredicted RBP19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 ANXA13P27216 316 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 ALDH1B1P30837 517 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 GCLMP48507 274 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 DR1Q01658 176 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 PPP3CAQ08209 521 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 STRIP1Q5VSL9 837 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 RAPGEF5Q92565 580 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 SLC5A5Q92911 643 aa19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 DDX20Q9UHI6 824 aaKnown RBP19.59■□□□□ 0.73
PTP4A3-202ENST00000349124 TMEM150BA6NC51 233 aa19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 PIK3CDO00329 1044 aa19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 MMP10P09238 476 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms