RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 EPN1Q9Y6I3 576 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 LAD1O00515 517 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 TRIM16O95361 564 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 HDAC4P56524 1084 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 GRK7Q8WTQ7 553 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 GJB4Q9NTQ9 266 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 HNRNPCL2B2RXH8 293 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 LIN7AO14910 233 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 HNRNPCL1O60812 293 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 AFPP02771 609 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 PRDX5P30044 214 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 ADCY1Q08828 1119 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 BZW1Q7L1Q6 419 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 PEX5LQ8IYB4 626 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 DCLK2Q8N568 766 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 LRGUKQ96M69 825 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 PNMA2Q9UL42 364 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 IRF6O14896 467 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 EIF2S1P05198 315 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 UBTFL6P0CB48 400 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 ATF2P15336 505 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 PLCG1P19174 1290 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 POLR2BP30876 1174 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 RSRC2Q7L4I2 434 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 RBM12BQ8IXT5 1001 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 ATL2Q8NHH9 583 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 SLC10A4Q96EP9 437 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 FHDC1Q9C0D6 1143 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 ASCC2Q9H1I8 757 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 SNX25Q9H3E2 840 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 RAD21L1Q9H4I0 556 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 OSBPL3Q9H4L5 887 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 TDRD3Q9H7E2 651 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 EHD2Q9NZN4 543 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 CORO1CQ9ULV4 474 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 C2CD2Q9Y426 696 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 SESN1Q9Y6P5 492 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 SETD1BQ9UPS6 1966 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 SART1O43290 800 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 NMT2O60551 498 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 IREB2P48200 963 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 DYNLT1P63172 113 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 CEP19Q96LK0 163 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 KCNF1Q9H3M0 494 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 AFF2P51816 1311 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 GFPT2O94808 682 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 KRT6AP02538 564 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 KRT6BP04259 564 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 MMEP08473 750 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 ALOX15P16050 662 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 CRKP46108 304 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 KRT6CP48668 564 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 TMEM259Q4ZIN3 620 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 NACC1Q96RE7 527 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 TSPAN18Q96SJ8 248 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 WDR11Q9BZH6 1224 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 FAM192AQ9GZU8 254 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 COA1Q9GZY4 146 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 ABCA8O94911 1581 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 ZCCHC11Q5TAX3 1644 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 SGK1O00141 431 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 SERPINB1P30740 379 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 ELMSAN1Q6PJG2 1045 aa11.84□□□□□ -0.51
SMARCE1-202ENST00000348513 ABCC12Q96J65 1359 aa11.83□□□□□ -0.51
SMARCE1-202ENST00000348513 USP17L5A8MUK1 530 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 TRAPPC10P48553 1259 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 ARHGEF18Q6ZSZ5 1173 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 RTKN2Q8IZC4 609 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 NLRP4Q96MN2 994 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 CCT7Q99832 543 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 ADGRL3Q9HAR2 1447 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 UBE2TQ9NPD8 197 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 C15orf41Q9Y2V0 281 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 HECW2Q9P2P5 1572 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 A0A1W2PQ27 194 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 A0A1W2PQ64 194 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 A0A1W2PQD8 194 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 PCP4L1A6NKN8 68 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 FAM83BQ5T0W9 1011 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 PDXDC2PQ6P474 469 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 ANO5Q75V66 913 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 RYBPQ8N488 228 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 NAF1Q96HR8 494 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 GSDMAQ96QA5 445 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 SMYD2Q9NRG4 433 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 USP27XA6NNY8 438 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 H7C1W4 665 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 APOA1P02647 267 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 PLA2G4BP0C869 781 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 FAM49AQ9H0Q0 323 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 NEDD4P46934 1319 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 PRPF3O43395 683 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 RPS6KA4O75676 772 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 GAP43P17677 238 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 SERPINB8P50452 374 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 EIF3BP55884 814 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms