RNA–Protein interactions for RNA: ENST00000347140.7

R3HDM2-201, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-201ENST00000347140 PCDHA1Q9Y5I3 950 aa16.76■□□□□ 0.27
R3HDM2-201ENST00000347140 TMEM120BA0PK00 339 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 HLA-DOAP06340 250 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 C3orf67Q6ZVT6 689 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 TGS1Q96RS0 853 aaKnown RBP16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 FGFBP2Q9BYJ0 223 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 DNAJC17Q9NVM6 304 aaKnown RBP16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 TRPM3Q9HCF6 1732 aaPredicted RBP16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 PITPNM2Q9BZ72 1349 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 ANKRD62A6NC57 917 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 USP17L15C9J2P7 530 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 USP17L13C9JLJ4 530 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 USP17L11C9JVI0 530 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 USP17L18D6R9N7 530 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 USP17L22D6RA61 530 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 USP17L17D6RBQ6 530 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 USP17L19D6RCP7 530 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 USP17L20D6RJB6 530 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 SLC16A3O15427 465 aaKnown RBP16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 BRAFP15056 766 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 MMP13P45452 471 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 MARSP56192 900 aaKnown RBP16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 MXRA7P84157 204 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 USP17L24Q0WX57 530 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 USP17L6PQ6QN14 398 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 STK33Q9BYT3 514 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 EIF4E1BA6NMX2 242 aaKnown RBP16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 CHMP2AO43633 222 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 ALDH5A1P51649 535 aaPredicted RBP16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 IL9RQ01113 521 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 STRN3Q13033 797 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 BTNL9Q6UXG8 535 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 KCTD1Q719H9 257 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 REEP2Q9BRK0 252 aa16.75■□□□□ 0.27
R3HDM2-201ENST00000347140 SFI1A8K8P3 1242 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 F8W031 263 aaPredicted RBP16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 SNX1Q13596 522 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 ZNF365Q70YC5 407 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 HES6Q96HZ4 224 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 ANO3Q9BYT9 981 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 BCL9O00512 1426 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 LRRD1A4D1F6 860 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 GAP43P17677 238 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 ADCY8P40145 1251 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 CETN2P41208 172 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 GPATCH4Q5T3I0 446 aaKnown RBP16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 C16orf86Q6ZW13 317 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 GSTA5Q7RTV2 222 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 CNOT7Q9UIV1 285 aaKnown RBP16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 RTCBQ9Y3I0 505 aaKnown RBP16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 ALG6Q9Y672 507 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 AKAP3O75969 853 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 TTLL1O95922 423 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 RASSF2P50749 326 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 KCNJ2P63252 427 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 SGO2Q562F6 1265 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 ADGRF4Q8IZF3 695 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 RPGRQ92834 1020 aaKnown RBP16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 PITPNM3Q9BZ71 974 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 MSH2P43246 934 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 RBBP5Q15291 538 aaKnown RBP16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 ECM1Q16610 540 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 DUPD1Q68J44 220 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 PPP1R21Q6ZMI0 780 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 FAM47EQ6ZV65 393 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 TPH2Q8IWU9 490 aa16.74■□□□□ 0.27
R3HDM2-201ENST00000347140 KIF3CO14782 793 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 ATF2P15336 505 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 CASP4P49662 377 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 RIPK1Q13546 671 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 MEX3CQ5U5Q3 659 aaKnown RBP16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 TBC1D22AQ8WUA7 517 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 ROPN1BQ9BZX4 212 aaPredicted RBP16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 THAP2Q9H0W7 228 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 ROPN1Q9HAT0 212 aaPredicted RBP16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 UFL1O94874 794 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 EPHA7Q15375 998 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 FAM178BQ8IXR5 827 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 KCTD10Q9H3F6 313 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.73■□□□□ 0.271e-7■■■■■ 172
R3HDM2-201ENST00000347140 ENO4A6NNW6 628 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 SNX3O60493 162 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 GGPS1O95749 300 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 FTLP02792 175 aaPredicted RBP16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 MUM1Q2TAK8 710 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 MFSD14BQ5SR56 506 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 TRMT10CQ7L0Y3 403 aaKnown RBP16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 INTS2Q9H0H0 1204 aaKnown RBP16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 RIOX1Q9H6W3 641 aa16.73■□□□□ 0.27
R3HDM2-201ENST00000347140 C6orf229H3BNL8 230 aa16.72■□□□□ 0.27
R3HDM2-201ENST00000347140 ZBTB5O15062 677 aa16.72■□□□□ 0.27
R3HDM2-201ENST00000347140 FAM228AQ86W67 206 aa16.72■□□□□ 0.27
R3HDM2-201ENST00000347140 RBM46Q8TBY0 533 aaKnown RBP16.72■□□□□ 0.27
R3HDM2-201ENST00000347140 PRCCQ92733 491 aaPredicted RBP16.72■□□□□ 0.27
R3HDM2-201ENST00000347140 UBE2TQ9NPD8 197 aaPredicted RBP16.72■□□□□ 0.27
R3HDM2-201ENST00000347140 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.72■□□□□ 0.27
R3HDM2-201ENST00000347140 TCEAL9Q9UHQ7 104 aa16.72■□□□□ 0.27
R3HDM2-201ENST00000347140 USP17L10C9JJH3 530 aa16.72■□□□□ 0.27
R3HDM2-201ENST00000347140 SMIM24O75264 130 aa16.72■□□□□ 0.27
R3HDM2-201ENST00000347140 RARGP13631 454 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms