RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 MARCH10Q8NA82 808 aaPredicted RBP11.69□□□□□ -0.54
CLCN6-202ENST00000346436 CEP95Q96GE4 821 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 TRIM17Q9Y577 477 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 SLC4A7Q9Y6M7 1214 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 EIF3CLB5ME19 914 aaKnown RBP11.69□□□□□ -0.54
CLCN6-202ENST00000346436 CTNND1O60716 968 aaKnown RBP11.69□□□□□ -0.54
CLCN6-202ENST00000346436 PLA2G4BP0C869 781 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 RAG1P15918 1043 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 ARHGAP4P98171 946 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 ADCY1Q08828 1119 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 IFT88Q13099 833 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 PDCLQ13371 301 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 CHST13Q8NET6 341 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 EIF3CQ99613 913 aaKnown RBP11.69□□□□□ -0.54
CLCN6-202ENST00000346436 SYNDIG1Q9H7V2 258 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 SNX17Q15036 470 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 USP17L6PQ6QN14 398 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 PLEKHH3Q7Z736 793 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 THNSL1Q8IYQ7 743 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 NKIRAS1Q9NYS0 192 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 ANGPTL3Q9Y5C1 460 aa11.69□□□□□ -0.54
CLCN6-202ENST00000346436 KPNA6O60684 536 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 UPP2O95045 317 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 KLRK1P26718 216 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 PLA2G4AP47712 749 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 DENND2CQ68D51 928 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 TTC23LQ6PF05 361 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 CAPN12Q6ZSI9 719 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 VPS33BQ9H267 617 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 PCIF1Q9H4Z3 704 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 RAB23Q9ULC3 237 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 HPSEQ9Y251 543 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 ZBTB5O15062 677 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 TADA2AO75478 443 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 PSMC2P35998 433 aaKnown RBP11.68□□□□□ -0.54
CLCN6-202ENST00000346436 ZNF667Q5HYK9 610 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 NSUN4Q96CB9 384 aaKnown RBP11.68□□□□□ -0.54
CLCN6-202ENST00000346436 DEFB129Q9H1M3 183 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 TMEM60Q9H2L4 133 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 PCDHB7Q9Y5E2 793 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 PI4K2BG5E9Z4 385 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 MAGEB2O15479 319 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 DRP2Q13474 957 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 HHIPL2Q6UWX4 724 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 MTRQ99707 1265 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 MFSD1Q9H3U5 465 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 ATP11BQ9Y2G3 1177 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 ATP8A1Q9Y2Q0 1164 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 PPP1R3GB7ZBB8 358 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 IFNAR2P48551 515 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 ARL4DP49703 201 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 USP50Q70EL3 339 aaPredicted RBP11.68□□□□□ -0.54
CLCN6-202ENST00000346436 PHLDB2Q86SQ0 1253 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 NXF1Q9UBU9 619 aaKnown RBP11.68□□□□□ -0.54
CLCN6-202ENST00000346436 FHOD1Q9Y613 1164 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 NOGQ13253 232 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 GRK7Q8WTQ7 553 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 TMEM169Q96HH4 297 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 AGXT2Q9BYV1 514 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 SMARCAD1Q9H4L7 1026 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 L2HGDHQ9H9P8 463 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 PARVGQ9HBI0 331 aa11.68□□□□□ -0.54
CLCN6-202ENST00000346436 ANKRD26Q9UPS8 1709 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 SMIM22K7EJ46 135 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 THAP12O43422 761 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 EARS2Q5JPH6 523 aaKnown RBP11.67□□□□□ -0.54
CLCN6-202ENST00000346436 RASGRP2Q7LDG7 609 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 ADGRA1Q86SQ6 560 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 PNKPQ96T60 521 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 RIC8AQ9NPQ8 531 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.67□□□□□ -0.54
CLCN6-202ENST00000346436 SERPINA10Q9UK55 444 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 RRN3P2A6NIE6 340 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 RGS16O15492 202 aaPredicted RBP11.67□□□□□ -0.54
CLCN6-202ENST00000346436 AFPP02771 609 aaKnown RBP11.67□□□□□ -0.54
CLCN6-202ENST00000346436 CYP2C19P33261 490 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 OSTNP61366 133 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 MESDQ14696 234 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 RPUSD2Q8IZ73 545 aaKnown RBP11.67□□□□□ -0.54
CLCN6-202ENST00000346436 TAB3Q8N5C8 712 aaPredicted RBP11.67□□□□□ -0.54
CLCN6-202ENST00000346436 PPP4R1Q8TF05 950 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 SEPT8Q92599 483 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 ACAP3Q96P50 834 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 GCNT4Q9P109 453 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 STK4Q13043 487 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 TMEM132BQ14DG7 1078 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 NTRK3Q16288 839 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 ZNF568Q3ZCX4 644 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 ZNF34Q8IZ26 560 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 SCFD2Q8WU76 684 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 MS4A14Q96JA4 679 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 TRPV6Q9H1D0 765 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 BARHL2Q9NY43 387 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 LIMA1Q9UHB6 759 aaKnown RBP11.67□□□□□ -0.54
CLCN6-202ENST00000346436 BAIAP2L1Q9UHR4 511 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 KNDC1Q76NI1 1749 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 NPHP3-ACAD11A0A0J9YXS1 232 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 PRRG1O14668 218 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 TRIM66O15016 1216 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 CLDN3O15551 220 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms