RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 NAB2Q15742 525 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 USP17L2Q6R6M4 530 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 TMEM2Q9UHN6 1383 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 NLRP1Q9C000 1473 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 PNMA6FA0A0J9YX94 578 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 ZBBXA8MT70 800 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 RHOBTB3O94955 611 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 ZBED1O96006 694 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 FCER1AP12319 257 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 ARHGEF16Q5VV41 709 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 ANKRD27Q96NW4 1050 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 ZFATQ9P243 1243 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 KPNA7A9QM74 516 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 FTLP02792 175 aaPredicted RBP19.27■□□□□ 0.68
SMC4-201ENST00000344722 TMC4Q7Z404 712 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 ZBED8Q8IZ13 594 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 TMBIM4Q9HC24 238 aa19.27■□□□□ 0.68
SMC4-201ENST00000344722 NCAPD2Q15021 1401 aa19.27■□□□□ 0.67
SMC4-201ENST00000344722 FAM47DPA6NHR8 397 aa19.27■□□□□ 0.67
SMC4-201ENST00000344722 WDR46O15213 610 aaKnown RBP19.27■□□□□ 0.67
SMC4-201ENST00000344722 SOX5P35711 763 aa19.27■□□□□ 0.67
SMC4-201ENST00000344722 PDIA2Q13087 525 aaKnown RBP19.27■□□□□ 0.67
SMC4-201ENST00000344722 FRMD5Q7Z6J6 570 aa19.27■□□□□ 0.67
SMC4-201ENST00000344722 SFR1Q86XK3 245 aa19.27■□□□□ 0.67
SMC4-201ENST00000344722 NUDCD3Q8IVD9 361 aa19.27■□□□□ 0.67
SMC4-201ENST00000344722 ENAHQ8N8S7 591 aaPredicted RBP19.27■□□□□ 0.67
SMC4-201ENST00000344722 RAPGEF5Q92565 580 aa19.27■□□□□ 0.67
SMC4-201ENST00000344722 DBR1Q9UK59 544 aaKnown RBP19.27■□□□□ 0.67
SMC4-201ENST00000344722 SNUPNO95149 360 aaKnown RBP19.26■□□□□ 0.67
SMC4-201ENST00000344722 ITIH2P19823 946 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 AP1B1Q10567 949 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 TMED8Q6PL24 325 aaPredicted RBP19.26■□□□□ 0.67
SMC4-201ENST00000344722 RFX8Q6ZV50 586 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 POTEMA6NI47 508 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 UBE2SQ16763 222 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 ARL8AQ96BM9 186 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 BHMT2Q9H2M3 363 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 RANBP17Q9H2T7 1088 aaKnown RBP19.26■□□□□ 0.67
SMC4-201ENST00000344722 CAPN9O14815 690 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 GHRP10912 638 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 CASP2P42575 452 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 IFRD2Q12894 506 aaPredicted RBP19.26■□□□□ 0.67
SMC4-201ENST00000344722 LONRF1Q17RB8 773 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 PPCSQ9HAB8 311 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 TMEM120BA0PK00 339 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 PFDN6O15212 129 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 GSTA4O15217 222 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 SASH3O75995 380 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 RABGAP1LQ5R372 815 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 COL23A1Q86Y22 540 aaPredicted RBP19.26■□□□□ 0.67
SMC4-201ENST00000344722 GLYCTKQ8IVS8 523 aa19.26■□□□□ 0.67
SMC4-201ENST00000344722 WARS2Q9UGM6 360 aaKnown RBP19.26■□□□□ 0.67
SMC4-201ENST00000344722 ESYT2A0FGR8 921 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 POLGP54098 1239 aaPredicted RBP19.25■□□□□ 0.67
SMC4-201ENST00000344722 KPNB1Q14974 876 aaKnown RBP19.25■□□□□ 0.67
SMC4-201ENST00000344722 CNPY4Q8N129 248 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 INTS2Q9H0H0 1204 aaKnown RBP19.25■□□□□ 0.67
SMC4-201ENST00000344722 ZNF804BA4D1E1 1349 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 ZNF609O15014 1411 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 LRRIQ4A6NIV6 560 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 SERPINB3P29508 390 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 ERVK-24P63145 666 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 DNAAF3Q8N9W5 541 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 CCSER1Q9C0I3 900 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 ADAM22Q9P0K1 906 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 PRPSAP2O60256 369 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 KRT82Q9NSB4 513 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.25■□□□□ 0.67
SMC4-201ENST00000344722 CFAP65Q6ZU64 1925 aaKnown RBP19.25■□□□□ 0.67
SMC4-201ENST00000344722 PXDNLA1KZ92 1463 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 PP2D1A8MPX8 630 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 CTDNEP1O95476 244 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 ATP6V1G2O95670 118 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 MYBL1P10243 752 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 CAVIN3Q969G5 261 aa19.25■□□□□ 0.67
SMC4-201ENST00000344722 MYCNP04198 464 aaPredicted RBP19.24■□□□□ 0.67
SMC4-201ENST00000344722 FDPSP14324 419 aaKnown RBP19.24■□□□□ 0.67
SMC4-201ENST00000344722 HDAC4P56524 1084 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 GPS1Q13098 491 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 CNGA3Q16281 694 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 LRRC34Q8IZ02 419 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 ATL2Q8NHH9 583 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 CASKIN2Q8WXE0 1202 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 FIS1Q9Y3D6 152 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 TET3O43151 1660 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 CCDC117Q8IWD4 279 aaPredicted RBP19.24■□□□□ 0.67
SMC4-201ENST00000344722 MCUQ8NE86 351 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 C1orf54Q8WWF1 131 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 KCNB2Q92953 911 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 CEP19Q96LK0 163 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 DNAJC7Q99615 494 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 GTF2IP78347 998 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 BTBD6Q96KE9 485 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 TRIM9Q9C026 710 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 TBC1D23Q9NUY8 699 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 TTC7AQ9ULT0 858 aaPredicted RBP19.24■□□□□ 0.67
SMC4-201ENST00000344722 ORC4O43929 436 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 KDM1AO60341 852 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 GUCY1A2P33402 732 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 OLFML2BQ68BL8 750 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms