RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 TRAIPQ9BWF2 469 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 MRPL9Q9BYD2 267 aaKnown RBP13.94□□□□□ -0.18
SGCA-202ENST00000344627 INO80BQ9C086 356 aaPredicted RBP13.94□□□□□ -0.18
SGCA-202ENST00000344627 TYW1Q9NV66 732 aaKnown RBP13.94□□□□□ -0.18
SGCA-202ENST00000344627 KIAA1671Q9BY89 1806 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 TMEM150BA6NC51 233 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 FSCN2O14926 492 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 DKC1O60832 514 aaKnown RBP eCLIP13.93□□□□□ -0.18
SGCA-202ENST00000344627 CTDNEP1O95476 244 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 KRT2P35908 639 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 TRIM29Q14134 588 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 GIT2Q14161 759 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 ME3Q16798 604 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 FAM102BQ5T8I3 360 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 LINC01465Q8N7H1 131 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 RNF169Q8NCN4 708 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 FAM20AQ96MK3 541 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 MBOAT7Q96N66 472 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 ZNF558Q96NG5 402 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 NAP1L4Q99733 375 aaKnown RBP13.93□□□□□ -0.18
SGCA-202ENST00000344627 PPME1Q9Y570 386 aa13.93□□□□□ -0.18
SGCA-202ENST00000344627 FNDC1Q4ZHG4 1894 aaPredicted RBP13.93□□□□□ -0.18
SGCA-202ENST00000344627 A0A0U1RQF3 1178 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 LINC01565O15544 149 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 BAG4O95429 457 aaKnown RBP13.92□□□□□ -0.18
SGCA-202ENST00000344627 LARGE1O95461 756 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 FGFR1P11362 822 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 GCFC2P16383 781 aaKnown RBP13.92□□□□□ -0.18
SGCA-202ENST00000344627 FGFR4P22455 802 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 GPC3P51654 580 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 PSMC5P62195 406 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 CLUL1Q15846 466 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 TPRNQ4KMQ1 711 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 TRIM67Q6ZTA4 783 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 ADGRD2Q7Z7M1 963 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 SUSD6Q92537 303 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 CASP10Q92851 521 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 NECTIN4Q96NY8 510 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 NIFKQ9BYG3 293 aaKnown RBP13.92□□□□□ -0.18
SGCA-202ENST00000344627 ADAMTS10Q9H324 1103 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 CWH43Q9H720 699 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 SUCLA2Q9P2R7 463 aaPredicted RBP13.92□□□□□ -0.18
SGCA-202ENST00000344627 MUTYHQ9UIF7 546 aa13.92□□□□□ -0.18
SGCA-202ENST00000344627 USP15Q9Y4E8 981 aaPredicted RBP13.92□□□□□ -0.18
SGCA-202ENST00000344627 EML1O00423 815 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 CSDE1O75534 798 aaKnown RBP13.91□□□□□ -0.18
SGCA-202ENST00000344627 SEC24BO95487 1268 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 GTF2F1P35269 517 aaKnown RBP eCLIP13.91□□□□□ -0.18
SGCA-202ENST00000344627 QARSP47897 775 aaKnown RBP13.91□□□□□ -0.18
SGCA-202ENST00000344627 NR5A1Q13285 461 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 KCNC3Q14003 757 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 TARBP2Q15633 366 aaKnown RBP13.91□□□□□ -0.18
SGCA-202ENST00000344627 PLA2G4FQ68DD2 849 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 NCAPH2Q6IBW4 605 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 PPP4R3AQ6IN85 833 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 KCNT2Q6UVM3 1135 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 RBM23Q86U06 439 aaKnown RBP13.91□□□□□ -0.18
SGCA-202ENST00000344627 ZNF410Q86VK4 478 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 RHPN2Q8IUC4 686 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 SUGP1Q8IWZ8 645 aaKnown RBP13.91□□□□□ -0.18
SGCA-202ENST00000344627 GTF3C6Q969F1 213 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 GCOM2Q9BZD3 368 aaPredicted RBP13.91□□□□□ -0.18
SGCA-202ENST00000344627 SPG21Q9NZD8 308 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 NR2E1Q9Y466 385 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 ATG2AQ2TAZ0 1938 aa13.91□□□□□ -0.18
SGCA-202ENST00000344627 JAK2O60674 1132 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 GLP2RO95838 553 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 P4HBP07237 508 aaKnown RBP13.9□□□□□ -0.18
SGCA-202ENST00000344627 FDPSP14324 419 aaKnown RBP13.9□□□□□ -0.18
SGCA-202ENST00000344627 DARSP14868 501 aaKnown RBP13.9□□□□□ -0.18
SGCA-202ENST00000344627 SFPQP23246 707 aaKnown RBP eCLIP13.9□□□□□ -0.18
SGCA-202ENST00000344627 ALDH7A1P49419 539 aaKnown RBP13.9□□□□□ -0.18
SGCA-202ENST00000344627 PTPN5P54829 565 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 ZXDAP98168 799 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 NHLH1Q02575 133 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 ITIH3Q06033 890 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 SIGLEC14Q08ET2 396 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 PPP2R5CQ13362 524 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 DRP2Q13474 957 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 SMC1AQ14683 1233 aaKnown RBP13.9□□□□□ -0.18
SGCA-202ENST00000344627 EARS2Q5JPH6 523 aaKnown RBP13.9□□□□□ -0.18
SGCA-202ENST00000344627 B3GNT9Q6UX72 402 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 HFE2Q6ZVN8 426 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 ECHDC2Q86YB7 292 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 POTEDQ86YR6 584 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 CEP170P1Q96L14 293 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 FBXL18Q96ME1 805 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 CASD1Q96PB1 797 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 TCF25Q9BQ70 676 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 KCNMB3Q9NPA1 279 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 ENTPD7Q9NQZ7 604 aa13.9□□□□□ -0.18
SGCA-202ENST00000344627 BARX2Q9UMQ3 279 aaPredicted RBP13.9□□□□□ -0.18
SGCA-202ENST00000344627 A0A087WZ62 844 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 FAM205CA6NFA0 338 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 TMEM221A6NGB7 291 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 M0R296 226 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 STBD1O95210 358 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 RAB27AP51159 221 aa13.89□□□□□ -0.19
SGCA-202ENST00000344627 POLGP54098 1239 aaPredicted RBP13.89□□□□□ -0.19
SGCA-202ENST00000344627 NPEPPSP55786 919 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms