RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 FILIP1Q7Z7B0 1213 aa8.15□□□□□ -1.11
ZNF540-202ENST00000343599 SGMS1Q86VZ5 419 aa8.15□□□□□ -1.11
ZNF540-202ENST00000343599 FMNL3Q8IVF7 1028 aa8.15□□□□□ -1.11
ZNF540-202ENST00000343599 SIRT2Q8IXJ6 389 aa8.15□□□□□ -1.11
ZNF540-202ENST00000343599 LRRC43Q8N309 656 aa8.15□□□□□ -1.11
ZNF540-202ENST00000343599 CHAMP1Q96JM3 812 aa8.15□□□□□ -1.11
ZNF540-202ENST00000343599 JADE2Q9NQC1 790 aa8.15□□□□□ -1.11
ZNF540-202ENST00000343599 SAP30BPQ9UHR5 308 aaKnown RBP8.15□□□□□ -1.11
ZNF540-202ENST00000343599 PLAGL2Q9UPG8 496 aa8.15□□□□□ -1.11
ZNF540-202ENST00000343599 SCAF8Q9UPN6 1271 aaKnown RBP8.15□□□□□ -1.11
ZNF540-202ENST00000343599 FARP1Q9Y4F1 1045 aaPredicted RBP8.15□□□□□ -1.11
ZNF540-202ENST00000343599 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.15□□□□□ -1.11
ZNF540-202ENST00000343599 IGKV6-21A0A0C4DH24 114 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.14□□□□□ -1.11
ZNF540-202ENST00000343599 TK2O00142 265 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 HBP1O60381 514 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 RECKO95980 971 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 TXNP10599 105 aaKnown RBP8.14□□□□□ -1.11
ZNF540-202ENST00000343599 SFNP31947 248 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 CLK2P49760 499 aaKnown RBP8.14□□□□□ -1.11
ZNF540-202ENST00000343599 LMNB2Q03252 620 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 GRIK3Q13003 919 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 MTMR3Q13615 1198 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 C1QTNF12Q5T7M4 302 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 NAIF1Q69YI7 327 aaPredicted RBP8.14□□□□□ -1.11
ZNF540-202ENST00000343599 IQCA1Q86XH1 822 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 RNF135Q8IUD6 432 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 RASEFQ8IZ41 740 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 TMEM47Q9BQJ4 181 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 NAPBQ9H115 298 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 EPHX3Q9H6B9 360 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 ARMT1Q9H993 441 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 CAPN8A6NHC0 703 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 TMEM232C9JQI7 657 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 LYPLA2O95372 231 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 SPIRE1Q08AE8 756 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 LRMPQ12912 555 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 FAM160B1Q5W0V3 765 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 TTC19Q6DKK2 380 aaPredicted RBP8.14□□□□□ -1.11
ZNF540-202ENST00000343599 CCDC186Q7Z3E2 898 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 TRPV6Q9H1D0 765 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 ENPP3O14638 875 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 TBX3O15119 743 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 AVPR2P30518 371 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 KIF5BP33176 963 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 LMAN1P49257 510 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 TBC1D8BQ0IIM8 1120 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 PTPN14Q15678 1187 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 ERCC6LQ2NKX8 1250 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 SPDYCQ5MJ68 293 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 MTSS1LQ765P7 747 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 ZNF598Q86UK7 904 aaKnown RBP8.14□□□□□ -1.11
ZNF540-202ENST00000343599 CCDC26Q8TAB7 109 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 OSBP2Q969R2 916 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 PLEKHA4Q9H4M7 779 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 TBC1D22BQ9NU19 505 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 CLEC1BQ9P126 229 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 CLIP2Q9UDT6 1046 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 MCM8Q9UJA3 840 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 PCDHB12Q9Y5F1 795 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 PCDHGA5Q9Y5G8 931 aa8.14□□□□□ -1.11
ZNF540-202ENST00000343599 DENND4CQ5VZ89 1909 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 TDRD15B5MCY1 1934 aaKnown RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 STXBP3O00186 592 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 GADD45BO75293 160 aaPredicted RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 GCFC2P16383 781 aaKnown RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 ELF1P32519 619 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 PBX2P40425 430 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 E2F5Q15329 346 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 OTOP3Q7RTS5 596 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 SEPT1Q8WYJ6 367 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 STAMQ92783 540 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 PMM1Q92871 262 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 SRRTQ9BXP5 876 aaKnown RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 FAM107BQ9H098 131 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 PUS7LQ9H0K6 701 aaKnown RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 VRTNQ9H8Y1 702 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 RAVER2Q9HCJ3 691 aaKnown RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 KAT6AQ92794 2004 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 C9IYK1 514 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 GCOM1H8Y6P7 765 aaPredicted RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 MYCP01106 439 aaPredicted RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 LGALS2P05162 132 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 NR3C2P08235 984 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 FAM163BP0C2L3 166 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 POLR2MP0CAP2 368 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 SMIM10L2AP0DMW4 78 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 SMIM10L2BP0DMW5 78 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 TDGF1P13385 188 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 HNRNPH1P31943 449 aaKnown RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 RPS6P62753 249 aaKnown RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 TFAP4Q01664 338 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 BAATQ14032 418 aaPredicted RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 FAM187BQ17R55 369 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 HSF5Q4G112 596 aaPredicted RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 KDF1Q8NAX2 398 aaPredicted RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 PDRG1Q9NUG6 133 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 ORC3Q9UBD5 711 aaPredicted RBP8.13□□□□□ -1.11
ZNF540-202ENST00000343599 TNNQ9UQP3 1299 aa8.13□□□□□ -1.11
ZNF540-202ENST00000343599 EPOPA6NHQ4 379 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms