RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 GKAP1Q5VSY0 366 aaPredicted RBP16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 TTC19Q6DKK2 380 aaPredicted RBP16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 ARMCX2Q7L311 632 aa16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 FBXL16Q8N461 479 aa16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 FBXL13Q8NEE6 735 aa16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 WHAMMQ8TF30 809 aa16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 C11orf70Q9BRQ4 267 aa16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 MRPL4Q9BYD3 311 aaKnown RBP16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 NFU1Q9UMS0 254 aa16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 ZRANB2O95218 330 aaKnown RBP eCLIP16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 TNFAIP2Q03169 654 aa16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 NAA30Q147X3 362 aaPredicted RBP16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 CCDC62Q6P9F0 684 aa16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 ELOA2Q8IYF1 753 aaPredicted RBP16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 STMN2Q93045 179 aa16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 NGRNQ9NPE2 291 aaKnown RBP16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 RBAKQ9NYW8 714 aaPredicted RBP16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 CTNND1O60716 968 aaKnown RBP16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 MYL3P08590 195 aa16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 RIT2Q99578 217 aa16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 AGPAT5Q9NUQ2 364 aa16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 HDAC6Q9UBN7 1215 aa16.78■□□□□ 0.28
CARMIL3-201ENST00000342740 TROVE2P10155 538 aaKnown RBP eCLIP16.77■□□□□ 0.28
CARMIL3-201ENST00000342740 CALRP27797 417 aaKnown RBP16.77■□□□□ 0.28
CARMIL3-201ENST00000342740 GPD1LQ8N335 351 aa16.77■□□□□ 0.28
CARMIL3-201ENST00000342740 WDR24Q96S15 920 aa16.77■□□□□ 0.28
CARMIL3-201ENST00000342740 MXRA8Q9BRK3 442 aa16.77■□□□□ 0.28
CARMIL3-201ENST00000342740 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.77■□□□□ 0.28
CARMIL3-201ENST00000342740 TXNP10599 105 aaKnown RBP16.77■□□□□ 0.28
CARMIL3-201ENST00000342740 ECE1P42892 770 aa16.77■□□□□ 0.28
CARMIL3-201ENST00000342740 IFNAR2P48551 515 aa16.77■□□□□ 0.28
CARMIL3-201ENST00000342740 NFRKBQ6P4R8 1299 aa16.77■□□□□ 0.28
CARMIL3-201ENST00000342740 EMBQ6PCB8 327 aa16.77■□□□□ 0.28
CARMIL3-201ENST00000342740 SIX6OS1Q8N1H7 587 aa16.77■□□□□ 0.28
CARMIL3-201ENST00000342740 KLHL14Q9P2G3 628 aa16.77■□□□□ 0.28
CARMIL3-201ENST00000342740 SLC37A4O43826 429 aa16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 GGPS1O95749 300 aa16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 ST3GAL1Q11201 340 aa16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 MCUR1Q96AQ8 359 aa16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 INTS9Q9NV88 658 aaKnown RBP16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 ASB14A6NK59 587 aa16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 PNMA6AP0CW24 399 aaPredicted RBP16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 RFX1P22670 979 aa16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 PSMA2P25787 234 aa16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 BASP1P80723 227 aaKnown RBP16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 EDRF1Q3B7T1 1238 aa16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 ATG4CQ96DT6 458 aa16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 RILPQ96NA2 401 aa16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 OSBPL9Q96SU4 736 aa16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 HPSEQ9Y251 543 aa16.77■□□□□ 0.27
CARMIL3-201ENST00000342740 DDTLA6NHG4 134 aaPredicted RBP16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 SLC26A4O43511 780 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 NCK2O43639 380 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 LPXNO60711 386 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 GPC3P51654 580 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 DARS2Q6PI48 645 aaKnown RBP16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 KSR1Q8IVT5 923 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 RNF149Q8NC42 400 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 INHBAP08476 426 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 TBXAS1P24557 533 aaPredicted RBP16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 SLMAPQ14BN4 828 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 PLCD3Q8N3E9 789 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 TC2NQ8N9U0 490 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 TIPINQ9BVW5 301 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 PPP1R3GB7ZBB8 358 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 ZNF18P17022 549 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 SOX5P35711 763 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 CAP2P40123 477 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 KCNJ6P48051 423 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 CDO1Q16878 200 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 GLE1Q53GS7 698 aaKnown RBP16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 DSTYKQ6XUX3 929 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 ITIH6Q6UXX5 1313 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 SALL1Q9NSC2 1324 aa16.76■□□□□ 0.27
CARMIL3-201ENST00000342740 CIB2O75838 187 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 MYBP10242 640 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 GNAT1P11488 350 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 PKN1Q16512 942 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 TWF2Q6IBS0 349 aaKnown RBP16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 KCNV1Q6PIU1 500 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 SDCCAG8Q86SQ7 713 aaPredicted RBP16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 CATSPER3Q86XQ3 398 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 AFAP1L2Q8N4X5 818 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 CDKL2Q92772 493 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 KCNH7Q9NS40 1196 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 KCND2Q9NZV8 630 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 DIS3Q9Y2L1 958 aaKnown RBP16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 SYNGAP1Q96PV0 1343 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 SLCO1A2P46721 670 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 RPS6P62753 249 aaKnown RBP16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 ATP11AP98196 1134 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 CUL1Q13616 776 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 PPFIBP2Q8ND30 876 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 ZWILCHQ9H900 591 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 PITPNM2Q9BZ72 1349 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 SPDYE2BA6NHP3 402 aa16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 WTIPA6NIX2 430 aaPredicted RBP16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 POLRMTO00411 1230 aaKnown RBP16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 SLC16A3O15427 465 aaKnown RBP16.75■□□□□ 0.27
CARMIL3-201ENST00000342740 SPDYE6P0CI01 402 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms