RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 EPB41P11171 864 aaKnown RBP16.4■□□□□ 0.22
TPM3-208ENST00000341485 UCHL3P15374 230 aa16.4■□□□□ 0.22
TPM3-208ENST00000341485 RPL13P26373 211 aaKnown RBP16.4■□□□□ 0.22
TPM3-208ENST00000341485 KLRC1P26715 233 aa16.4■□□□□ 0.22
TPM3-208ENST00000341485 NMT1P30419 496 aaKnown RBP16.4■□□□□ 0.22
TPM3-208ENST00000341485 NAP1L1P55209 391 aaKnown RBP16.4■□□□□ 0.22
TPM3-208ENST00000341485 MKRN3Q13064 507 aaKnown RBP16.4■□□□□ 0.22
TPM3-208ENST00000341485 EXOC3L4Q17RC7 722 aa16.4■□□□□ 0.22
TPM3-208ENST00000341485 GPAT2Q6NUI2 795 aa16.4■□□□□ 0.22
TPM3-208ENST00000341485 CCNI2Q6ZMN8 369 aaPredicted RBP16.4■□□□□ 0.22
TPM3-208ENST00000341485 IRF2BP2Q7Z5L9 587 aa16.4■□□□□ 0.22
TPM3-208ENST00000341485 NLRX1Q86UT6 975 aa16.4■□□□□ 0.22
TPM3-208ENST00000341485 GSPT2Q8IYD1 628 aaKnown RBP16.4■□□□□ 0.22
TPM3-208ENST00000341485 PACSIN1Q9BY11 444 aa16.4■□□□□ 0.22
TPM3-208ENST00000341485 IKZF4Q9H2S9 585 aa16.4■□□□□ 0.22
TPM3-208ENST00000341485 METTL14Q9HCE5 456 aaKnown RBP16.4■□□□□ 0.22
TPM3-208ENST00000341485 LUC7LQ9NQ29 371 aaKnown RBP16.4■□□□□ 0.22
TPM3-208ENST00000341485 ADAMTS1Q9UHI8 967 aa16.4■□□□□ 0.22
TPM3-208ENST00000341485 PFASO15067 1338 aa16.4■□□□□ 0.22
TPM3-208ENST00000341485 EIF3DO15371 548 aaKnown RBP eCLIP16.39■□□□□ 0.21
TPM3-208ENST00000341485 PALMO75781 387 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 MYCT1Q8N699 235 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 SLC35C1Q96A29 364 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 VIPAS39Q9H9C1 493 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 SIX2Q9NPC8 291 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 WRAP73Q9P2S5 460 aaPredicted RBP16.39■□□□□ 0.21
TPM3-208ENST00000341485 AJAP1Q9UKB5 411 aaPredicted RBP16.39■□□□□ 0.21
TPM3-208ENST00000341485 ADAM21Q9UKJ8 722 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 PNMA3Q9UL41 463 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 CNMDO75829 334 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 CETPP11597 493 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 TNNT3P45378 269 aaPredicted RBP16.39■□□□□ 0.21
TPM3-208ENST00000341485 GTF2A2P52657 109 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 ZC2HC1CQ53FD0 456 aaPredicted RBP16.39■□□□□ 0.21
TPM3-208ENST00000341485 TCERG1LQ5VWI1 586 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 ZNF571Q7Z3V5 609 aaPredicted RBP16.39■□□□□ 0.21
TPM3-208ENST00000341485 VSIG10LQ86VR7 867 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 BORCS6Q96GS4 357 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 LRRC1Q9BTT6 524 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 MOV10L1Q9BXT6 1211 aaKnown RBP16.39■□□□□ 0.21
TPM3-208ENST00000341485 TCEAL9Q9UHQ7 104 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 TSKSQ9UJT2 592 aa16.39■□□□□ 0.21
TPM3-208ENST00000341485 SLC25A27O95847 323 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 PTK2Q05397 1052 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 KIAA0753Q2KHM9 967 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 CCDC181Q5TID7 509 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 GBP6Q6ZN66 633 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 MIER3Q7Z3K6 550 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 HDAC7Q8WUI4 952 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 PKNOX2Q96KN3 472 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 SPAG5Q96R06 1193 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 FIZ1Q96SL8 496 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 TBC1D22BQ9NU19 505 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 VPS18Q9P253 973 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 HPCAL4Q9UM19 191 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 FAN1Q9Y2M0 1017 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 PCDHB13Q9Y5F0 798 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 FTCDO95954 541 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 COPB2P35606 906 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 CCDC70Q6NSX1 233 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 B3GNT9Q6UX72 402 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 KSR1Q8IVT5 923 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 DNERQ8NFT8 737 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 CCDC102AQ96A19 550 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 EXOC4Q96A65 974 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 GPRASP2Q96D09 838 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 ACBD3Q9H3P7 528 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 PARVGQ9HBI0 331 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 DMGDHQ9UI17 866 aaKnown RBP16.38■□□□□ 0.21
TPM3-208ENST00000341485 SAMM50Q9Y512 469 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 PCDHGC5Q9Y5F6 944 aa16.38■□□□□ 0.21
TPM3-208ENST00000341485 CCL15-CCL14A0A0B4J2E2 113 aa16.37■□□□□ 0.21
TPM3-208ENST00000341485 MUTP22033 750 aa16.37■□□□□ 0.21
TPM3-208ENST00000341485 MATR3P43243 847 aaKnown RBP eCLIP16.37■□□□□ 0.21
TPM3-208ENST00000341485 ITGB3BPQ13352 177 aaPredicted RBP16.37■□□□□ 0.21
TPM3-208ENST00000341485 NFIL3Q16649 462 aa16.37■□□□□ 0.21
TPM3-208ENST00000341485 CCL15Q16663 113 aa16.37■□□□□ 0.21
TPM3-208ENST00000341485 FAM71BQ8TC56 605 aa16.37■□□□□ 0.21
TPM3-208ENST00000341485 NEK9Q8TD19 979 aa16.37■□□□□ 0.21
TPM3-208ENST00000341485 MS4A14Q96JA4 679 aa16.37■□□□□ 0.21
TPM3-208ENST00000341485 GDAP1L1Q96MZ0 367 aa16.37■□□□□ 0.21
TPM3-208ENST00000341485 NACC1Q96RE7 527 aa16.37■□□□□ 0.21
TPM3-208ENST00000341485 HINFPQ9BQA5 517 aa16.37■□□□□ 0.21
TPM3-208ENST00000341485 RBPJLQ9UBG7 517 aa16.37■□□□□ 0.21
TPM3-208ENST00000341485 STAM2O75886 525 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 PAFAH1B1P43034 410 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 AARSP49588 968 aaKnown RBP eCLIP16.36■□□□□ 0.21
TPM3-208ENST00000341485 ZNF131P52739 623 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 JAM2P57087 298 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 MRPS25P82663 173 aaKnown RBP16.36■□□□□ 0.21
TPM3-208ENST00000341485 FAM186BQ8IYM0 893 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 AENQ8WTP8 325 aaKnown RBP16.36■□□□□ 0.21
TPM3-208ENST00000341485 GTF3C2Q8WUA4 911 aaPredicted RBP16.36■□□□□ 0.21
TPM3-208ENST00000341485 RUBCNQ92622 972 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 IWS1Q96ST2 819 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 SELENOOQ9BVL4 669 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 TXNRD2Q9NNW7 524 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 PSD3Q9NYI0 1048 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 GCNT4Q9P109 453 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 FBXL5Q9UKA1 691 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms