RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 POF1BQ8WVV4 589 aa22.52■■□□□ 1.2
SYNE2-201ENST00000341472 TCP11Q8WWU5 503 aa22.52■■□□□ 1.2
SYNE2-201ENST00000341472 PSPC1Q8WXF1 523 aaKnown RBP22.52■■□□□ 1.2
SYNE2-201ENST00000341472 CASD1Q96PB1 797 aa22.52■■□□□ 1.2
SYNE2-201ENST00000341472 FOXP1Q9H334 677 aaPredicted RBP22.52■■□□□ 1.2
SYNE2-201ENST00000341472 COL4A3BPQ9Y5P4 624 aa22.52■■□□□ 1.2
SYNE2-201ENST00000341472 ASAP2O43150 1006 aa22.51■■□□□ 1.19
SYNE2-201ENST00000341472 CSPG5O95196 566 aa22.51■■□□□ 1.19
SYNE2-201ENST00000341472 LYPLA2O95372 231 aa22.51■■□□□ 1.19
SYNE2-201ENST00000341472 DNAJB1P25685 340 aa22.51■■□□□ 1.19
SYNE2-201ENST00000341472 MCM7P33993 719 aa22.51■■□□□ 1.19
SYNE2-201ENST00000341472 RABEP1Q15276 862 aa22.51■■□□□ 1.19
SYNE2-201ENST00000341472 CSPP1Q1MSJ5 1256 aa22.51■■□□□ 1.19
SYNE2-201ENST00000341472 CATSPER4Q7RTX7 472 aa22.51■■□□□ 1.19
SYNE2-201ENST00000341472 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.51■■□□□ 1.19
SYNE2-201ENST00000341472 NEK9Q8TD19 979 aa22.51■■□□□ 1.19
SYNE2-201ENST00000341472 PPP2R3CQ969Q6 453 aa22.51■■□□□ 1.19
SYNE2-201ENST00000341472 TMEM60Q9H2L4 133 aa22.51■■□□□ 1.19
SYNE2-201ENST00000341472 ANKEF1Q9NU02 776 aa22.51■■□□□ 1.19
SYNE2-201ENST00000341472 RNF19AQ9NV58 838 aa22.51■■□□□ 1.19
SYNE2-201ENST00000341472 MYH9P35579 1960 aaKnown RBP22.5■■□□□ 1.19
SYNE2-201ENST00000341472 GAS2O43903 313 aaKnown RBP22.5■■□□□ 1.19
SYNE2-201ENST00000341472 LAMTOR4Q0VGL1 99 aa22.5■■□□□ 1.19
SYNE2-201ENST00000341472 HYAL1Q12794 435 aa22.5■■□□□ 1.19
SYNE2-201ENST00000341472 GNL2Q13823 731 aaKnown RBP22.5■■□□□ 1.19
SYNE2-201ENST00000341472 COL19A1Q14993 1142 aa22.5■■□□□ 1.19
SYNE2-201ENST00000341472 ZNF174Q15697 407 aa22.5■■□□□ 1.19
SYNE2-201ENST00000341472 PUS10Q3MIT2 529 aaKnown RBP22.5■■□□□ 1.19
SYNE2-201ENST00000341472 MICAL1Q8TDZ2 1067 aa22.5■■□□□ 1.19
SYNE2-201ENST00000341472 IGFLR1Q9H665 355 aa22.5■■□□□ 1.19
SYNE2-201ENST00000341472 CWH43Q9H720 699 aa22.5■■□□□ 1.19
SYNE2-201ENST00000341472 CLDND1Q9NY35 253 aa22.5■■□□□ 1.19
SYNE2-201ENST00000341472 MYO7AQ13402 2215 aa22.5■■□□□ 1.19
SYNE2-201ENST00000341472 EVPLQ92817 2033 aa22.5■■□□□ 1.19
SYNE2-201ENST00000341472 SIP14410 1827 aa22.5■■□□□ 1.19
SYNE2-201ENST00000341472 H3BQ06 376 aaPredicted RBP22.49■■□□□ 1.19
SYNE2-201ENST00000341472 SKIP12755 728 aa22.49■■□□□ 1.19
SYNE2-201ENST00000341472 LAG3P18627 525 aa22.49■■□□□ 1.19
SYNE2-201ENST00000341472 UBE3AQ05086 875 aa22.49■■□□□ 1.19
SYNE2-201ENST00000341472 EMC2Q15006 297 aa22.49■■□□□ 1.19
SYNE2-201ENST00000341472 TWF2Q6IBS0 349 aaKnown RBP22.49■■□□□ 1.19
SYNE2-201ENST00000341472 LRRC55Q6ZSA7 311 aa22.49■■□□□ 1.19
SYNE2-201ENST00000341472 SRGAP1Q7Z6B7 1085 aa22.49■■□□□ 1.19
SYNE2-201ENST00000341472 ZNF598Q86UK7 904 aaKnown RBP22.49■■□□□ 1.19
SYNE2-201ENST00000341472 THNSL1Q8IYQ7 743 aa22.49■■□□□ 1.19
SYNE2-201ENST00000341472 COLGALT1Q8NBJ5 622 aa22.49■■□□□ 1.19
SYNE2-201ENST00000341472 TRAIPQ9BWF2 469 aa22.49■■□□□ 1.19
SYNE2-201ENST00000341472 UPF2Q9HAU5 1272 aaKnown RBP22.49■■□□□ 1.19
SYNE2-201ENST00000341472 IFT122Q9HBG6 1241 aa22.49■■□□□ 1.19
SYNE2-201ENST00000341472 BMP2KQ9NSY1 1161 aaPredicted RBP22.49■■□□□ 1.19
SYNE2-201ENST00000341472 PIN4Q9Y237 131 aaKnown RBP22.49■■□□□ 1.19
SYNE2-201ENST00000341472 BRWD1Q9NSI6 2320 aa22.49■■□□□ 1.19
SYNE2-201ENST00000341472 XIRP2A4UGR9 3374 aa22.49■■□□□ 1.19
SYNE2-201ENST00000341472 BDP1A6H8Y1 2624 aa22.48■■□□□ 1.19
SYNE2-201ENST00000341472 ST18O60284 1047 aa22.48■■□□□ 1.19
SYNE2-201ENST00000341472 FGF18O76093 207 aa22.48■■□□□ 1.19
SYNE2-201ENST00000341472 XRCC6P12956 609 aaKnown RBP eCLIP22.48■■□□□ 1.19
SYNE2-201ENST00000341472 PHKA2P46019 1235 aa22.48■■□□□ 1.19
SYNE2-201ENST00000341472 CTC1Q2NKJ3 1217 aa22.48■■□□□ 1.19
SYNE2-201ENST00000341472 PTCRAQ6ISU1 281 aaPredicted RBP22.48■■□□□ 1.19
SYNE2-201ENST00000341472 MTRQ99707 1265 aa22.48■■□□□ 1.19
SYNE2-201ENST00000341472 HCSTQ9UBK5 93 aa22.48■■□□□ 1.19
SYNE2-201ENST00000341472 PUF60Q9UHX1 559 aaKnown RBP22.48■■□□□ 1.19
SYNE2-201ENST00000341472 REV3LO60673 3130 aa22.48■■□□□ 1.19
SYNE2-201ENST00000341472 GRXCR2A6NFK2 248 aa22.47■■□□□ 1.19
SYNE2-201ENST00000341472 IRS1P35568 1242 aa22.47■■□□□ 1.19
SYNE2-201ENST00000341472 ORC2Q13416 577 aaPredicted RBP22.47■■□□□ 1.19
SYNE2-201ENST00000341472 CLLU1OSQ5K130 101 aa22.47■■□□□ 1.19
SYNE2-201ENST00000341472 FERMT3Q86UX7 667 aa22.47■■□□□ 1.19
SYNE2-201ENST00000341472 NOSTRINQ8IVI9 506 aa22.47■■□□□ 1.19
SYNE2-201ENST00000341472 LRRC43Q8N309 656 aa22.47■■□□□ 1.19
SYNE2-201ENST00000341472 CCDC43Q96MW1 224 aaKnown RBP22.47■■□□□ 1.19
SYNE2-201ENST00000341472 A0A087WWV3 80 aa22.46■■□□□ 1.19
SYNE2-201ENST00000341472 ZNF623O75123 536 aa22.46■■□□□ 1.19
SYNE2-201ENST00000341472 ATF7P17544 494 aaPredicted RBP22.46■■□□□ 1.19
SYNE2-201ENST00000341472 LTBRP36941 435 aa22.46■■□□□ 1.19
SYNE2-201ENST00000341472 TECP42680 631 aa22.46■■□□□ 1.19
SYNE2-201ENST00000341472 TRAPPC10P48553 1259 aa22.46■■□□□ 1.19
SYNE2-201ENST00000341472 MXD4Q14582 209 aaPredicted RBP22.46■■□□□ 1.19
SYNE2-201ENST00000341472 TTC38Q5R3I4 469 aa22.46■■□□□ 1.19
SYNE2-201ENST00000341472 KCNT2Q6UVM3 1135 aa22.46■■□□□ 1.19
SYNE2-201ENST00000341472 RNF149Q8NC42 400 aa22.46■■□□□ 1.19
SYNE2-201ENST00000341472 HELQQ8TDG4 1101 aa22.46■■□□□ 1.19
SYNE2-201ENST00000341472 PIGOQ8TEQ8 1089 aa22.46■■□□□ 1.19
SYNE2-201ENST00000341472 ZNF558Q96NG5 402 aa22.46■■□□□ 1.19
SYNE2-201ENST00000341472 NOL7Q9UMY1 257 aaKnown RBP22.46■■□□□ 1.19
SYNE2-201ENST00000341472 FAM50BQ9Y247 325 aa22.46■■□□□ 1.19
SYNE2-201ENST00000341472 POTEMA6NI47 508 aa22.45■■□□□ 1.18
SYNE2-201ENST00000341472 DGAT1O75907 488 aa22.45■■□□□ 1.18
SYNE2-201ENST00000341472 OR52Z1P0C646 297 aa22.45■■□□□ 1.18
SYNE2-201ENST00000341472 GTF2F1P35269 517 aaKnown RBP eCLIP22.45■■□□□ 1.18
SYNE2-201ENST00000341472 PLCB3Q01970 1234 aa22.45■■□□□ 1.18
SYNE2-201ENST00000341472 KRT17Q04695 432 aa22.45■■□□□ 1.18
SYNE2-201ENST00000341472 ADAM15Q13444 863 aa22.45■■□□□ 1.18
SYNE2-201ENST00000341472 TLE6Q9H808 572 aa22.45■■□□□ 1.18
SYNE2-201ENST00000341472 MINDY3Q9H8M7 445 aa22.45■■□□□ 1.18
SYNE2-201ENST00000341472 TUFT1Q9NNX1 390 aa22.45■■□□□ 1.18
SYNE2-201ENST00000341472 XPNPEP1Q9NQW7 623 aa22.45■■□□□ 1.18
SYNE2-201ENST00000341472 FAM105AQ9NUU6 356 aa22.45■■□□□ 1.18
SYNE2-201ENST00000341472 COL4A4P53420 1690 aaPredicted RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms