RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 MROH1Q8NDA8 1641 aa20.75■□□□□ 0.91
CDK13-202ENST00000340829 IFT122Q9HBG6 1241 aa20.75■□□□□ 0.91
CDK13-202ENST00000340829 ZNF302Q9NR11 478 aa20.75■□□□□ 0.91
CDK13-202ENST00000340829 MAGED2Q9UNF1 606 aaPredicted RBP20.75■□□□□ 0.91
CDK13-202ENST00000340829 SOX5P35711 763 aa20.75■□□□□ 0.91
CDK13-202ENST00000340829 KLK7P49862 253 aa20.75■□□□□ 0.91
CDK13-202ENST00000340829 CYFIP1Q7L576 1253 aa20.75■□□□□ 0.91
CDK13-202ENST00000340829 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.75■□□□□ 0.912e-6■■□□□ 13.8
CDK13-202ENST00000340829 CCDC38Q502W7 563 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 HSPH1Q92598 858 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 FAM193BQ96PV7 902 aaPredicted RBP20.74■□□□□ 0.91
CDK13-202ENST00000340829 MTRQ99707 1265 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 POLR3FQ9H1D9 316 aaPredicted RBP20.74■□□□□ 0.91
CDK13-202ENST00000340829 ARL4AP40617 200 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 TOB1P50616 345 aaPredicted RBP20.74■□□□□ 0.91
CDK13-202ENST00000340829 HHIPL2Q6UWX4 724 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 EFCAB13Q8IY85 973 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 TCP11Q8WWU5 503 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 TUFT1Q9NNX1 390 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 C6orf118Q5T5N4 469 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 VCX3BQ9H321 246 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 NGRNQ9NPE2 291 aaKnown RBP20.74■□□□□ 0.91
CDK13-202ENST00000340829 SNX12Q9UMY4 172 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 NOC2LQ9Y3T9 749 aaKnown RBP20.74■□□□□ 0.91
CDK13-202ENST00000340829 MORC2Q9Y6X9 1032 aaPredicted RBP20.74■□□□□ 0.91
CDK13-202ENST00000340829 SLIT1O75093 1534 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 SESN3P58005 492 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 FAM133BQ5BKY9 247 aaKnown RBP20.74■□□□□ 0.91
CDK13-202ENST00000340829 ADGRA1Q86SQ6 560 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 FBXO40Q9UH90 709 aa20.74■□□□□ 0.91
CDK13-202ENST00000340829 ADCY2Q08462 1091 aa20.73■□□□□ 0.91
CDK13-202ENST00000340829 TMEM35BQ8NCS4 154 aa20.73■□□□□ 0.91
CDK13-202ENST00000340829 RPAP3Q9H6T3 665 aaPredicted RBP20.73■□□□□ 0.91
CDK13-202ENST00000340829 PRR12Q9ULL5 1215 aa20.73■□□□□ 0.91
CDK13-202ENST00000340829 FUCA2Q9BTY2 467 aa20.73■□□□□ 0.91
CDK13-202ENST00000340829 LRRC4Q9HBW1 653 aa20.73■□□□□ 0.91
CDK13-202ENST00000340829 HAUS2Q9NVX0 235 aa20.73■□□□□ 0.91
CDK13-202ENST00000340829 ZBTB12Q9Y330 459 aaPredicted RBP20.73■□□□□ 0.91
CDK13-202ENST00000340829 MT-ND3P03897 115 aa20.73■□□□□ 0.91
CDK13-202ENST00000340829 PLCD3Q8N3E9 789 aa20.73■□□□□ 0.91
CDK13-202ENST00000340829 AFG3L2Q9Y4W6 797 aa20.73■□□□□ 0.91
CDK13-202ENST00000340829 ZNF18P17022 549 aa20.73■□□□□ 0.91
CDK13-202ENST00000340829 GARSP41250 739 aaKnown RBP20.73■□□□□ 0.91
CDK13-202ENST00000340829 RSRC2Q7L4I2 434 aaKnown RBP20.73■□□□□ 0.91
CDK13-202ENST00000340829 RNF25Q96BH1 459 aaPredicted RBP20.73■□□□□ 0.91
CDK13-202ENST00000340829 LRRC1Q9BTT6 524 aa20.73■□□□□ 0.91
CDK13-202ENST00000340829 ZNF699Q32M78 642 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 ZNF568Q3ZCX4 644 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 WDR91A4D1P6 747 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 GRID2IPA4D2P6 1211 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 MYBP10242 640 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 RFFLQ8WZ73 363 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 SMYD2Q9NRG4 433 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 VGLL3A8MV65 326 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 MUM1Q2TAK8 710 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 LMBRD2Q68DH5 695 aaPredicted RBP20.72■□□□□ 0.91
CDK13-202ENST00000340829 SLC10A4Q96EP9 437 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 PCDHA10Q9Y5I2 948 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 TJP3O95049 919 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 YWHABP31946 246 aaKnown RBP20.72■□□□□ 0.91
CDK13-202ENST00000340829 DNAAF3Q8N9W5 541 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 CFAP61Q8NHU2 1237 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 PYROXD1Q8WU10 500 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 FAM167AQ96KS9 214 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 SAYSD1Q9NPB0 183 aa20.72■□□□□ 0.91
CDK13-202ENST00000340829 CA4P22748 312 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 HMGCS2P54868 508 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 EN1Q05925 392 aaPredicted RBP20.71■□□□□ 0.91
CDK13-202ENST00000340829 SNCBQ16143 134 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 SLC18A3Q16572 532 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 TRIM68Q6AZZ1 485 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 PDIK1LQ8N165 341 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 OR6B3Q8NGW1 331 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 MS4A14Q96JA4 679 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 GINM1Q9NU53 330 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 HPSEQ9Y251 543 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 A0A087WUV0 522 aaPredicted RBP20.71■□□□□ 0.91
CDK13-202ENST00000340829 AP5Z1O43299 807 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 ECE1P42892 770 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 RBM43Q6ZSC3 357 aaKnown RBP20.71■□□□□ 0.91
CDK13-202ENST00000340829 CENPUQ71F23 418 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 TXNRD3Q86VQ6 643 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 ACAD9Q9H845 621 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 CD44P16070 742 aaKnown RBP20.71■□□□□ 0.91
CDK13-202ENST00000340829 MTMR2Q13614 643 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 CATSPER4Q7RTX7 472 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 PSPC1Q8WXF1 523 aaKnown RBP20.71■□□□□ 0.91
CDK13-202ENST00000340829 BAG2O95816 211 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 PPP4CP60510 307 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 CFAP36Q96G28 342 aa20.71■□□□□ 0.91
CDK13-202ENST00000340829 ZBED1O96006 694 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 PLS3P13797 630 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 RCN2Q14257 317 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 RSPH3Q86UC2 560 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 TAF1DQ9H5J8 278 aaPredicted RBP20.7■□□□□ 0.9
CDK13-202ENST00000340829 NTRK3Q16288 839 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 PPP6R3Q5H9R7 873 aaPredicted RBP20.7■□□□□ 0.9
CDK13-202ENST00000340829 RHPN2Q8IUC4 686 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 ELOA2Q8IYF1 753 aaPredicted RBP20.7■□□□□ 0.9
CDK13-202ENST00000340829 COG1Q8WTW3 980 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms