RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 BMP3P12645 472 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 TARSP26639 723 aaKnown RBP13.2□□□□□ -0.3
ATXN3-201ENST00000340660 RPS9P46781 194 aaKnown RBP13.2□□□□□ -0.3
ATXN3-201ENST00000340660 STAT2P52630 851 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 MGAT3Q09327 533 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 FZD5Q13467 585 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 SMC1AQ14683 1233 aaKnown RBP13.2□□□□□ -0.3
ATXN3-201ENST00000340660 MLF2Q15773 248 aaPredicted RBP13.2□□□□□ -0.3
ATXN3-201ENST00000340660 C12orf60Q5U649 245 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 RNF43Q68DV7 783 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 SEPT14Q6ZU15 432 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 RNF217Q8TC41 542 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 SLC22A17Q8WUG5 538 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 C16orf70Q9BSU1 422 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 MKNK1Q9BUB5 465 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 ARRDC1-AS1Q9H2J1 176 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 SMOC1Q9H4F8 434 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 CWH43Q9H720 699 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 AGO3Q9H9G7 860 aaKnown RBP13.2□□□□□ -0.3
ATXN3-201ENST00000340660 POLMQ9NP87 494 aaPredicted RBP13.2□□□□□ -0.3
ATXN3-201ENST00000340660 CLIP2Q9UDT6 1046 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 SUPT16HQ9Y5B9 1047 aaKnown RBP13.2□□□□□ -0.3
ATXN3-201ENST00000340660 PCDHB9Q9Y5E1 797 aa13.2□□□□□ -0.3
ATXN3-201ENST00000340660 APC2O95996 2303 aa13.19□□□□□ -0.3
ATXN3-201ENST00000340660 NRCAMQ92823 1304 aa13.19□□□□□ -0.3
ATXN3-201ENST00000340660 SLC35F4A4IF30 521 aa13.19□□□□□ -0.3
ATXN3-201ENST00000340660 FAM181BA6NEQ2 426 aa13.19□□□□□ -0.3
ATXN3-201ENST00000340660 TBKBP1A7MCY6 615 aa13.19□□□□□ -0.3
ATXN3-201ENST00000340660 GPC5P78333 572 aa13.19□□□□□ -0.3
ATXN3-201ENST00000340660 FBXO47Q5MNV8 452 aa13.19□□□□□ -0.3
ATXN3-201ENST00000340660 ZBTB41Q5SVQ8 909 aa13.19□□□□□ -0.3
ATXN3-201ENST00000340660 CABP7Q86V35 215 aa13.19□□□□□ -0.3
ATXN3-201ENST00000340660 DBNDD2Q9BQY9 259 aa13.19□□□□□ -0.3
ATXN3-201ENST00000340660 SFXN1Q9H9B4 322 aa13.19□□□□□ -0.3
ATXN3-201ENST00000340660 KCNK4Q9NYG8 393 aa13.19□□□□□ -0.3
ATXN3-201ENST00000340660 LOXHD1Q8IVV2 1947 aa13.19□□□□□ -0.3
ATXN3-201ENST00000340660 PYCARD-AS1I3L0S3 204 aa13.18□□□□□ -0.3
ATXN3-201ENST00000340660 SCG2P13521 617 aa13.18□□□□□ -0.3
ATXN3-201ENST00000340660 CEACAM1P13688 526 aa13.18□□□□□ -0.3
ATXN3-201ENST00000340660 CD52P31358 61 aa13.18□□□□□ -0.3
ATXN3-201ENST00000340660 PBX3P40426 434 aa13.18□□□□□ -0.3
ATXN3-201ENST00000340660 PRKCQQ04759 706 aa13.18□□□□□ -0.3
ATXN3-201ENST00000340660 SCAPQ12770 1279 aa13.18□□□□□ -0.3
ATXN3-201ENST00000340660 HTR4Q13639 388 aa13.18□□□□□ -0.3
ATXN3-201ENST00000340660 RALBP1Q15311 655 aa13.18□□□□□ -0.3
ATXN3-201ENST00000340660 LCORLQ8N3X6 602 aa13.18□□□□□ -0.3
ATXN3-201ENST00000340660 ANTXR1Q9H6X2 564 aa13.18□□□□□ -0.3
ATXN3-201ENST00000340660 CYLDQ9NQC7 956 aa13.18□□□□□ -0.3
ATXN3-201ENST00000340660 DDX41Q9UJV9 622 aaKnown RBP13.18□□□□□ -0.3
ATXN3-201ENST00000340660 SRPK3Q9UPE1 567 aa13.18□□□□□ -0.3
ATXN3-201ENST00000340660 ACACAQ13085 2346 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 FNDC1Q4ZHG4 1894 aaPredicted RBP13.17□□□□□ -0.3
ATXN3-201ENST00000340660 ANHXE9PGG2 379 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 UBTFL1P0CB47 393 aaPredicted RBP13.17□□□□□ -0.3
ATXN3-201ENST00000340660 IBSPP21815 317 aaPredicted RBP13.17□□□□□ -0.3
ATXN3-201ENST00000340660 PTGIRP43119 386 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 SLC44A4Q53GD3 710 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 CCDC158Q5M9N0 1113 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 FAM102BQ5T8I3 360 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 FOXD4L5Q5VV16 416 aaPredicted RBP13.17□□□□□ -0.3
ATXN3-201ENST00000340660 TSHZ1Q6ZSZ6 1077 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 FAM160B2Q86V87 743 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 GMCL1P1Q8NEA9 526 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 STAG1Q8WVM7 1258 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 MKL1Q969V6 931 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 ZNF512BQ96KM6 892 aaPredicted RBP13.17□□□□□ -0.3
ATXN3-201ENST00000340660 MPHOSPH6Q99547 160 aaKnown RBP13.17□□□□□ -0.3
ATXN3-201ENST00000340660 RPP25Q9BUL9 199 aaKnown RBP13.17□□□□□ -0.3
ATXN3-201ENST00000340660 BCAS3Q9H6U6 928 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 SETD4Q9NVD3 440 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 NUMBLQ9Y6R0 609 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 DOCK8Q8NF50 2099 aa13.17□□□□□ -0.3
ATXN3-201ENST00000340660 IGKV6D-41A0A0C4DH26 115 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 ATXN7O15265 892 aaPredicted RBP13.16□□□□□ -0.3
ATXN3-201ENST00000340660 PRKAB2O43741 272 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 PPFIA4O75335 1185 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 ICAM1P05362 532 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 LAG3P18627 525 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 IKQ13123 557 aaPredicted RBP13.16□□□□□ -0.3
ATXN3-201ENST00000340660 LAMC2Q13753 1193 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 SLFN13Q68D06 897 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 DNERQ8NFT8 737 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 CHURC1Q8WUH1 139 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 CLEC4DQ8WXI8 215 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 CHMP4CQ96CF2 233 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 LRFN2Q9ULH4 789 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 ISY1Q9ULR0 285 aaKnown RBP13.16□□□□□ -0.3
ATXN3-201ENST00000340660 RAXQ9Y2V3 346 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 SDK1Q7Z5N4 2213 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 ITPR3Q14573 2671 aa13.16□□□□□ -0.3
ATXN3-201ENST00000340660 FAM221BA6H8Z2 402 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 C4orf47A7E2U8 309 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 CHURC1-FNTBB4DL54 471 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 RASA1P20936 1047 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 CA8P35219 290 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 FNTBP49356 437 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 RPS6P62753 249 aaKnown RBP13.15□□□□□ -0.3
ATXN3-201ENST00000340660 ADAM17P78536 824 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 KRT76Q01546 638 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 ADCY1Q08828 1119 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms