RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 LONP2Q86WA8 852 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 AGGF1Q8N302 714 aaeCLIP10.15□□□□□ -0.79
NECAP1-201ENST00000339754 KLHL23Q8NBE8 558 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 SUPT20HQ8NEM7 779 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 ATL2Q8NHH9 583 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 FAM81AQ8TBF8 368 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 UCMAQ8WVF2 138 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 DNAJC9Q8WXX5 260 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 ROPN1BQ9BZX4 212 aaPredicted RBP10.15□□□□□ -0.79
NECAP1-201ENST00000339754 TRIM4Q9C037 500 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 ROPN1Q9HAT0 212 aaPredicted RBP10.15□□□□□ -0.79
NECAP1-201ENST00000339754 BARHL2Q9NY43 387 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 KLHL14Q9P2G3 628 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 DIS3Q9Y2L1 958 aaKnown RBP10.15□□□□□ -0.79
NECAP1-201ENST00000339754 SIGLEC16A6NMB1 481 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 DDX3XO00571 662 aaKnown RBP eCLIP10.14□□□□□ -0.79
NECAP1-201ENST00000339754 CYTH3O43739 400 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 PDE8AO60658 829 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 GNA14O95837 355 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 GH1P01241 217 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 RARGP13631 454 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 UCHL3P15374 230 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 RASA1P20936 1047 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 PPATQ06203 517 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 KCNH2Q12809 1159 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 KCNK18Q7Z418 384 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 RBBP8NLQ8NC74 664 aaPredicted RBP10.14□□□□□ -0.79
NECAP1-201ENST00000339754 ARHGEF2Q92974 986 aaKnown RBP10.14□□□□□ -0.79
NECAP1-201ENST00000339754 TMEM237Q96Q45 408 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 DDX23Q9BUQ8 820 aaKnown RBP10.14□□□□□ -0.79
NECAP1-201ENST00000339754 MLXIPLQ9NP71 852 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 TXLNGQ9NUQ3 528 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 INTUQ9ULD6 942 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 FOXO6A8MYZ6 492 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 RXRBP28702 533 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 GNAQP50148 359 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 POLE2P56282 527 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 IRGCQ6NXR0 463 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 OTUD6AQ7L8S5 288 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 HEATR3Q7Z4Q2 680 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 TTC8Q8TAM2 541 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 RAD54LQ92698 747 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 DNAJC19Q96DA6 116 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 ZNF333Q96JL9 665 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 NUDT12Q9BQG2 462 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 FGFBP2Q9BYJ0 223 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 MYLK2Q9H1R3 596 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 CARD9Q9H257 536 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 OSGEPQ9NPF4 335 aa10.14□□□□□ -0.79
NECAP1-201ENST00000339754 SEC63Q9UGP8 760 aaKnown RBP10.14□□□□□ -0.79
NECAP1-201ENST00000339754 SMAPO00193 183 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 ATP5HO75947 161 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 T-ENOLP0DO92 83 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 TXKP42681 527 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 RANBP1P43487 201 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 GALCP54803 685 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 PRPF4BQ13523 1007 aaKnown RBP10.13□□□□□ -0.79
NECAP1-201ENST00000339754 MTFR1Q15390 333 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 LONRF1Q17RB8 773 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 CCDC152Q4G0S7 254 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 WASHC2DQ5SRD0 308 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 OLIG1Q8TAK6 271 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 GDAP1Q8TB36 358 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 SH3TC2Q8TF17 1288 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 SLC7A6OSQ96CW6 309 aaPredicted RBP10.13□□□□□ -0.79
NECAP1-201ENST00000339754 C18orf8Q96DM3 657 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 TRAPPC9Q96Q05 1148 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 SLC4A9Q96Q91 983 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 MTMR9Q96QG7 549 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 ABCF2Q9UG63 623 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 TRMT112Q9UI30 125 aaKnown RBP10.13□□□□□ -0.79
NECAP1-201ENST00000339754 MAD2L2Q9UI95 211 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 ZBTB12Q9Y330 459 aaPredicted RBP10.13□□□□□ -0.79
NECAP1-201ENST00000339754 CASZ1Q86V15 1759 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 EYA4O95677 639 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 STARD3NLO95772 234 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 PYGBP11216 843 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 ANXA13P27216 316 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 COASYQ13057 564 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 MKRN3Q13064 507 aaKnown RBP10.13□□□□□ -0.79
NECAP1-201ENST00000339754 ZNF211Q13398 564 aaPredicted RBP10.13□□□□□ -0.79
NECAP1-201ENST00000339754 NONOQ15233 471 aaKnown RBP eCLIP10.13□□□□□ -0.79
NECAP1-201ENST00000339754 TSNAXIP1Q2TAA8 658 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 TRIM74Q86UV6 250 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 TRIM73Q86UV7 250 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 ZC3H3Q8IXZ2 948 aaKnown RBP10.13□□□□□ -0.79
NECAP1-201ENST00000339754 ANKRD42Q8N9B4 389 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 SLC35G2Q8TBE7 412 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 ZNF384Q8TF68 577 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 INPP5DQ92835 1189 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 TGS1Q96RS0 853 aaKnown RBP10.13□□□□□ -0.79
NECAP1-201ENST00000339754 NAP1L3Q99457 506 aaPredicted RBP10.13□□□□□ -0.79
NECAP1-201ENST00000339754 TBC1D10AQ9BXI6 508 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 VCXQ9H320 206 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 ATP8A2Q9NTI2 1148 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.13□□□□□ -0.79
NECAP1-201ENST00000339754 MTRF1LQ9UGC7 380 aaKnown RBP10.13□□□□□ -0.79
NECAP1-201ENST00000339754 HAO1Q9UJM8 370 aa10.13□□□□□ -0.79
NECAP1-201ENST00000339754 AJAP1Q9UKB5 411 aaPredicted RBP10.13□□□□□ -0.79
NECAP1-201ENST00000339754 USP20Q9Y2K6 914 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms