RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CYP26B1Q9NR63 512 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 PNMA2Q9UL42 364 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 FAM184BQ9ULE4 1060 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 PCDHA13Q9Y5I0 950 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 WDR81Q562E7 1941 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 MCM3APO60318 1980 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 MYH10P35580 1976 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 DENND3A2RUS2 1198 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 FARP2O94887 1054 aaPredicted RBP8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 ATP1A1P05023 1023 aaKnown RBP8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 ADRB2P07550 413 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 PSAPP07602 524 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 CNGA1P29973 690 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 CYLC1P35663 651 aaPredicted RBP8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 FMO5P49326 533 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 PPP3CAQ08209 521 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 PPIL2Q13356 520 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 SFMBT2Q5VUG0 894 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 CBWD2Q8IUF1 395 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 FBXO16Q8IX29 292 aaPredicted RBP8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 DNERQ8NFT8 737 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 JAKMIP2Q96AA8 810 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 ZNF668Q96K58 619 aaPredicted RBP8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 DRC1Q96MC2 740 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 IWS1Q96ST2 819 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 IFIH1Q9BYX4 1025 aaKnown RBP8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 ANKEF1Q9NU02 776 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 HSPBP1Q9NZL4 362 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 CAPN6Q9Y6Q1 641 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 SUPT20HL2P0C7V6 817 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 GCLMP48507 274 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 CDK17Q00537 523 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 PTK2Q05397 1052 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 ZNF571Q7Z3V5 609 aaPredicted RBP8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 SMAP1Q8IYB5 467 aaPredicted RBP8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 CCDC170Q8IYT3 715 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 ZBTB9Q96C00 473 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 ERO1AQ96HE7 468 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 TOPORSQ9NS56 1045 aaPredicted RBP8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 TBX20Q9UMR3 447 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 FRMD4BQ9Y2L6 1034 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 TTLL13PA6NNM8 815 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 ZNF185O15231 689 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 SLC16A3O15427 465 aaKnown RBP8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 BUB1O43683 1085 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 MOCS3O95396 460 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 GGPS1O95749 300 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 EDN1P05305 212 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 EDNRBP24530 442 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 NCKAP1LP55160 1127 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 SCARA3Q6AZY7 606 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 IQCEQ6IPM2 695 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 PHLDB3Q6NSJ2 640 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 ARMC9Q7Z3E5 817 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 ATP6V0A1Q93050 837 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 CCDC127Q96BQ5 260 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 MS4A4AQ96JQ5 239 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 PSMB7Q99436 277 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 METTL14Q9HCE5 456 aaKnown RBP8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 ACP6Q9NPH0 428 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 KMT5AQ9NQR1 393 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 ZNF302Q9NR11 478 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 MAFBQ9Y5Q3 323 aaPredicted RBP8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 NFASCO94856 1347 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 CTAGE9A4FU28 777 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 TADA3O75528 432 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 ATG7O95352 703 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 GJB1P08034 283 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 TCF7P36402 384 aaPredicted RBP8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 MAGEA1P43355 309 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 ERVK-9P63128 1117 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 KRT83P78385 493 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 PPP2R3AQ06190 1150 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 BFSP1Q12934 665 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 SPA17Q15506 151 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 FBXO38Q6PIJ6 1188 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 GBP6Q6ZN66 633 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 OTUD6AQ7L8S5 288 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 KAT5Q92993 513 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 ZBTB45Q96K62 511 aaPredicted RBP8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 ACCSQ96QU6 501 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 RRAGCQ9HB90 399 aa8.08□□□□□ -1.12
SRFBP1-201ENST00000339397 MKI67P46013 3256 aaKnown RBP8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 EMSYQ7Z589 1322 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 MYH9P35579 1960 aaKnown RBP8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 GFPT2O94808 682 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 TUBB4AP04350 444 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 ZSCAN20P17040 1043 aaPredicted RBP8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 ICAM3P32942 547 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 VAV2P52735 878 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 WNT7BP56706 349 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 KLHL30Q0D2K2 578 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 DMP1Q13316 513 aaPredicted RBP8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 PTPROQ16827 1216 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 ARHGAP44Q17R89 818 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 MIS18BP1Q6P0N0 1132 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 LMO3Q8TAP4 145 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 ASAP3Q8TDY4 903 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 TRAPPC12Q8WVT3 735 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms