RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 SLC16A1P53985 500 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 UBXN2AP68543 259 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PLA2G7Q13093 441 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 ITGADQ13349 1161 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 ART3Q13508 389 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PRKD1Q15139 912 aaPredicted RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 NONOQ15233 471 aaKnown RBP eCLIP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 RUNDC3AQ59EK9 446 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 FAM83BQ5T0W9 1011 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 NECAB2Q7Z6G3 386 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 UBL4BQ8N7F7 174 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 ANKRD49Q8WVL7 239 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 TANKQ92844 425 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 SNX21Q969T3 373 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PRPF18Q99633 342 aaKnown RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 CRB3Q9BUF7 120 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 SLC6A16Q9GZN6 736 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 ALDH8A1Q9H2A2 487 aaPredicted RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 LDAHQ9H6V9 325 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 ACAD9Q9H845 621 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 FBRSL1Q9HCM7 1045 aaKnown RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PDE11AQ9HCR9 933 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 SAMSN1Q9NSI8 373 aaKnown RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 CPSF3Q9UKF6 684 aaKnown RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 ZNF148Q9UQR1 794 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 SCRIBQ14160 1630 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 TRBV23-1A0A0A0MS06 115 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 TRAV20A0A0B4J274 112 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 FAM47DPA6NHR8 397 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 E2F3O00716 465 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 DNAJB6O75190 326 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 RNASEH2AO75792 299 aaKnown RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 SMNDC1O75940 238 aaKnown RBP eCLIP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PDE9AO76083 593 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 GHRP10912 638 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 COL6A2P12110 1019 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 U2AF2P26368 475 aaKnown RBP eCLIP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 SLC8A1P32418 973 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 GGT5P36269 586 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 CENPAP49450 140 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PDE1AP54750 535 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 GPR139Q6DWJ6 353 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 DARS2Q6PI48 645 aaKnown RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 C19orf35Q6ZS72 473 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 ELAC2Q9BQ52 826 aaKnown RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 CEP44Q9C0F1 390 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 RNF38Q9H0F5 515 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 KLHL25Q9H0H3 589 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 UNC93B1Q9H1C4 597 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PLEKHA5Q9HAU0 1116 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 C8orf4Q9NR00 106 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PACSIN2Q9UNF0 486 aaPredicted RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 TMEM5Q9Y2B1 443 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 THRAP3Q9Y2W1 955 aaKnown RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 RTCBQ9Y3I0 505 aaKnown RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 GPC6Q9Y625 555 aaPredicted RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 TLL2Q9Y6L7 1015 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 MAP3K1Q13233 1512 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 SALL3Q9BXA9 1300 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PPP1R2P9O14990 202 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 CTAGE8P0CG41 777 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PTPN7P35236 360 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 HIRAP54198 1017 aaPredicted RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 HSD17B7P56937 341 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PLD1Q13393 1074 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 MTX1Q13505 466 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 ALDH1L2Q3SY69 923 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 THOC7Q6I9Y2 204 aaKnown RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PPP4R3AQ6IN85 833 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 CTAGE4Q8IX94 777 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 ANKRD13CQ8N6S4 541 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 B4GALNT2Q8NHY0 566 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 ZFPM2Q8WW38 1151 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PRCCQ92733 491 aaPredicted RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 ERP44Q9BS26 406 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 POGKQ9P215 609 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 USP21Q9UK80 565 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 PCDHGC3Q9UN70 934 aa3.46□□□□□ -1.86
SOCS4-201ENST00000339298 C14orf166Q9Y224 244 aaKnown RBP3.46□□□□□ -1.86
SOCS4-201ENST00000339298 CLEC3AO75596 197 aa3.45□□□□□ -1.86
SOCS4-201ENST00000339298 PARP1P09874 1014 aaKnown RBP3.45□□□□□ -1.86
SOCS4-201ENST00000339298 ARHGAP25P42331 645 aa3.45□□□□□ -1.86
SOCS4-201ENST00000339298 STT3AP46977 705 aa3.45□□□□□ -1.86
SOCS4-201ENST00000339298 SLC7A5Q01650 507 aa3.45□□□□□ -1.86
SOCS4-201ENST00000339298 FMR1Q06787 632 aaKnown RBP eCLIP3.45□□□□□ -1.86
SOCS4-201ENST00000339298 ZNF267Q14586 743 aaPredicted RBP3.45□□□□□ -1.86
SOCS4-201ENST00000339298 LBRQ14739 615 aaKnown RBP3.45□□□□□ -1.86
SOCS4-201ENST00000339298 TKFCQ3LXA3 575 aa3.45□□□□□ -1.86
SOCS4-201ENST00000339298 FSTL5Q8N475 847 aaPredicted RBP3.45□□□□□ -1.86
SOCS4-201ENST00000339298 CELF2-AS1Q8N7Q2 184 aa3.45□□□□□ -1.86
SOCS4-201ENST00000339298 IGSF22Q8N9C0 903 aa3.45□□□□□ -1.86
SOCS4-201ENST00000339298 TTYH3Q9C0H2 523 aa3.45□□□□□ -1.86
SOCS4-201ENST00000339298 KLHL4Q9C0H6 718 aa3.45□□□□□ -1.86
SOCS4-201ENST00000339298 ABCG8Q9H221 673 aa3.45□□□□□ -1.86
SOCS4-201ENST00000339298 SLC32A1Q9H598 525 aa3.45□□□□□ -1.86
SOCS4-201ENST00000339298 MMRN2Q9H8L6 949 aa3.45□□□□□ -1.86
SOCS4-201ENST00000339298 SLC28A3Q9HAS3 691 aa3.45□□□□□ -1.86
SOCS4-201ENST00000339298 SH2B1Q9NRF2 756 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms