RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 SCAF8Q9UPN6 1271 aaKnown RBP15.25■□□□□ 0.03
PCDH8-201ENST00000338862 TRIM33Q9UPN9 1127 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 BCL9O00512 1426 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 CLDN3O15551 220 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 PDHA1P08559 390 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 BCRP11274 1271 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 SLC8A1P32418 973 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 BARGINQ6ZT62 677 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 TNS2Q63HR2 1409 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 MYCNP04198 464 aaPredicted RBP15.25■□□□□ 0.03
PCDH8-201ENST00000338862 CTNNA2P26232 953 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 ATP11AP98196 1134 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 ITIH3Q06033 890 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 CLEC4GQ6UXB4 293 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 RFX8Q6ZV50 586 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 IRF2BP2Q7Z5L9 587 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 CPNE8Q86YQ8 564 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 DDX23Q9BUQ8 820 aaKnown RBP15.25■□□□□ 0.03
PCDH8-201ENST00000338862 EDEM3Q9BZQ6 932 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 INTUQ9ULD6 942 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 PIAS1O75925 651 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 UBOX5O94941 541 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 SOX5P35711 763 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 NFIAQ12857 509 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 DAB2IPQ5VWQ8 1189 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 STXBP4Q6ZWJ1 553 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 SUPT20HQ8NEM7 779 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 RFFLQ8WZ73 363 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 SPDL1Q96EA4 605 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 YIPF3Q9GZM5 350 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 VPS37BQ9H9H4 285 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 ALG13Q9NP73 1137 aaKnown RBP15.24■□□□□ 0.03
PCDH8-201ENST00000338862 M0R2N6 131 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 CPP00450 1065 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 COMTP21964 271 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 ZBTB16Q05516 673 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 GIT2Q14161 759 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 ASTE1Q2TB18 679 aaPredicted RBP15.24■□□□□ 0.03
PCDH8-201ENST00000338862 SLFN12Q8IYM2 578 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 RTFDC1Q9BY42 306 aaPredicted RBP15.24■□□□□ 0.03
PCDH8-201ENST00000338862 KLHL14Q9P2G3 628 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 DAGLAQ9Y4D2 1042 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 GOLGA8SH3BPF8 625 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 GOLGA8MH3BSY2 632 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 SUN1O94901 812 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 FGRP09769 529 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 BRAFP15056 766 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 ATF7P17544 494 aaPredicted RBP15.24■□□□□ 0.03
PCDH8-201ENST00000338862 ZNF662Q6ZS27 426 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 NT5DC3Q86UY8 548 aa15.24■□□□□ 0.03
PCDH8-201ENST00000338862 EIF2AK1Q9BQI3 630 aaKnown RBP15.24■□□□□ 0.03
PCDH8-201ENST00000338862 INTS2Q9H0H0 1204 aaKnown RBP15.24■□□□□ 0.03
PCDH8-201ENST00000338862 KCPQ6ZWJ8 1503 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 IGF2BP3O00425 579 aaKnown RBP eCLIP15.23■□□□□ 0.03
PCDH8-201ENST00000338862 CYP26A1O43174 497 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 PPP1R11O60927 126 aaPredicted RBP15.23■□□□□ 0.03
PCDH8-201ENST00000338862 CREB1P16220 341 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 KCNJ2P63252 427 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 GRAPQ13588 217 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 UBAP2Q5T6F2 1119 aaKnown RBP15.23■□□□□ 0.03
PCDH8-201ENST00000338862 LMBRD2Q68DH5 695 aaPredicted RBP15.23■□□□□ 0.03
PCDH8-201ENST00000338862 TRPM8Q7Z2W7 1104 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 PASD1Q8IV76 773 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 GRAPLQ8TC17 118 aaPredicted RBP15.23■□□□□ 0.03
PCDH8-201ENST00000338862 FBF1Q8TES7 1133 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 KAT5Q92993 513 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 AMNQ9BXJ7 453 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 STMN4Q9H169 189 aaPredicted RBP15.23■□□□□ 0.03
PCDH8-201ENST00000338862 GANQ9H2C0 597 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 PARVGQ9HBI0 331 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 AIPL1Q9NZN9 384 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 NID2Q14112 1375 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 C4AP0C0L4 1744 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 C4BP0C0L5 1744 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 EMSYQ7Z589 1322 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 IGSF9BQ9UPX0 1349 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 SCN11AQ9UI33 1791 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 EAPPQ56P03 285 aaPredicted RBP15.23■□□□□ 0.03
PCDH8-201ENST00000338862 SYCP2LQ5T4T6 812 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 PRUNE1Q86TP1 453 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 SAAL1Q96ER3 474 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 SLITRK6Q9H5Y7 841 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 ETNK1Q9HBU6 452 aa15.23■□□□□ 0.03
PCDH8-201ENST00000338862 TYW1Q9NV66 732 aaKnown RBP15.23■□□□□ 0.03
PCDH8-201ENST00000338862 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.23■□□□□ 0.03
PCDH8-201ENST00000338862 TMEM120BA0PK00 339 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 A8MUI8 341 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 CNOT10Q9H9A5 744 aaKnown RBP15.22■□□□□ 0.03
PCDH8-201ENST00000338862 ECEL1O95672 775 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 MYCLP12524 364 aaPredicted RBP15.22■□□□□ 0.03
PCDH8-201ENST00000338862 SETDB1Q15047 1291 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 ARSHQ5FYA8 562 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 DPH6Q7L8W6 267 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 ALG3Q92685 438 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 FER1L4A9Z1Z3 1794 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 YY1P25490 414 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 FMO5P49326 533 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 CBWD6Q4V339 395 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 CBWD3Q5JTY5 395 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 CBWD5Q5RIA9 395 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms