RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 FAM213AQ9BRX8 229 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 CEP72Q9P209 647 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 HMGB1P1B2RPK0 211 aaPredicted RBP8.28□□□□□ -1.08
TRIM2-201ENST00000338700 STK25O00506 426 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 TJP3O95049 919 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 NDUFA10O95299 355 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 COASYQ13057 564 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 TMED2Q15363 201 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 TKFCQ3LXA3 575 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 SAMD7Q7Z3H4 446 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 SCN4BQ8IWT1 228 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 SRRM1Q8IYB3 904 aaKnown RBP8.28□□□□□ -1.08
TRIM2-201ENST00000338700 ZNF70Q9UC06 446 aaPredicted RBP8.28□□□□□ -1.08
TRIM2-201ENST00000338700 HPCAL4Q9UM19 191 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 GSG1L2A8MUP6 293 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 CALB1P05937 261 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 PMLP29590 882 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 CCDC38Q502W7 563 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 BCL2L12Q9HB09 334 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 INTS9Q9NV88 658 aaKnown RBP8.28□□□□□ -1.08
TRIM2-201ENST00000338700 SOWAHDA6NJG2 315 aa8.27□□□□□ -1.08
TRIM2-201ENST00000338700 KIF28PB7ZC32 967 aa8.27□□□□□ -1.08
TRIM2-201ENST00000338700 C19orf81C9J6K1 198 aa8.27□□□□□ -1.08
TRIM2-201ENST00000338700 MT-ND3P03897 115 aa8.27□□□□□ -1.08
TRIM2-201ENST00000338700 SLFNL1Q499Z3 407 aa8.27□□□□□ -1.08
TRIM2-201ENST00000338700 INTS5Q6P9B9 1019 aaKnown RBP8.27□□□□□ -1.08
TRIM2-201ENST00000338700 LRRC31Q6UY01 552 aa8.27□□□□□ -1.08
TRIM2-201ENST00000338700 ACRBPQ8NEB7 543 aa8.27□□□□□ -1.08
TRIM2-201ENST00000338700 SPDYE1Q8NFV5 336 aaPredicted RBP8.27□□□□□ -1.08
TRIM2-201ENST00000338700 CHAMP1Q96JM3 812 aa8.27□□□□□ -1.08
TRIM2-201ENST00000338700 VPS33BQ9H267 617 aa8.27□□□□□ -1.08
TRIM2-201ENST00000338700 NGRNQ9NPE2 291 aaKnown RBP8.27□□□□□ -1.08
TRIM2-201ENST00000338700 E9PMD0 336 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 IPO5O00410 1097 aaKnown RBP8.27□□□□□ -1.09
TRIM2-201ENST00000338700 C2orf54Q08AI8 447 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 CYP4F22Q6NT55 531 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 KLC3Q6P597 504 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 CPVLQ9H3G5 476 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 SPTLC3Q9NUV7 552 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 ADAM22Q9P0K1 906 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 KDM6AO15550 1401 aaPredicted RBP8.27□□□□□ -1.09
TRIM2-201ENST00000338700 COL5A2P05997 1499 aaPredicted RBP8.27□□□□□ -1.09
TRIM2-201ENST00000338700 DDNO94850 711 aaPredicted RBP8.27□□□□□ -1.09
TRIM2-201ENST00000338700 CD2BP2O95400 341 aaKnown RBP8.27□□□□□ -1.09
TRIM2-201ENST00000338700 PEX19P40855 299 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 USP50Q70EL3 339 aaPredicted RBP8.27□□□□□ -1.09
TRIM2-201ENST00000338700 OR6J1Q8NGC5 347 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 UPF1Q92900 1129 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRIM2-201ENST00000338700 RBM41Q96IZ5 413 aaKnown RBP8.27□□□□□ -1.09
TRIM2-201ENST00000338700 TTC25Q96NG3 672 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 SLC9A2Q9UBY0 812 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 NRBP1Q9UHY1 535 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 BNIP3LO60238 219 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 CASP2P42575 452 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 AP3M2P53677 418 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 ALKBH5Q6P6C2 394 aaKnown RBP8.27□□□□□ -1.09
TRIM2-201ENST00000338700 Q9H521 79 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 FNDC3AQ9Y2H6 1198 aaKnown RBP8.27□□□□□ -1.09
TRIM2-201ENST00000338700 UBE4BO95155 1302 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 POTEB3A0JP26 581 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 POTECB2RU33 542 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 NBPF26B4DH59 902 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 SUN1O94901 812 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 HSPA8P11142 646 aaKnown RBP8.27□□□□□ -1.09
TRIM2-201ENST00000338700 KNOP1Q1ED39 458 aaKnown RBP8.27□□□□□ -1.09
TRIM2-201ENST00000338700 TMTC4Q5T4D3 741 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 NBPF10Q6P3W6 841 aaKnown RBP8.27□□□□□ -1.09
TRIM2-201ENST00000338700 POTEBQ6S5H4 581 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 LDHDQ86WU2 507 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 NBPF15Q8N660 670 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 LXNQ9BS40 222 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 KLC2Q9H0B6 622 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 FAN1Q9Y2M0 1017 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 ATP8A1Q9Y2Q0 1164 aa8.27□□□□□ -1.09
TRIM2-201ENST00000338700 AKR1B1P15121 316 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 VAMP7P51809 220 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 DR1Q01658 176 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 CENPUQ71F23 418 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 PPP2R3CQ969Q6 453 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 UBE2Q2LH0YL09 131 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 HMGCS2P54868 508 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 MTMR2Q13614 643 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 KIAA1755Q5JYT7 1200 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 SPOPLQ6IQ16 392 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 PCGF5Q86SE9 256 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 TTC13Q8NBP0 860 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 LOC102724159A0A0B4J2E5 919 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 KCNJ6P48051 423 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 CDC42EP1Q00587 391 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 PWP2Q15269 919 aaKnown RBP8.26□□□□□ -1.09
TRIM2-201ENST00000338700 C12orf60Q5U649 245 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 KRT39Q6A163 491 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 GPC2Q8N158 579 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 LPAR1Q92633 364 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 FAF2Q96CS3 445 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 EIF2AK1Q9BQI3 630 aaKnown RBP8.26□□□□□ -1.09
TRIM2-201ENST00000338700 OSBPL5Q9H0X9 879 aaPredicted RBP8.26□□□□□ -1.09
TRIM2-201ENST00000338700 MAP3K20Q9NYL2 800 aaKnown RBP8.26□□□□□ -1.09
TRIM2-201ENST00000338700 BAIAP2L1Q9UHR4 511 aa8.26□□□□□ -1.09
TRIM2-201ENST00000338700 PYCARDQ9ULZ3 195 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms