RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 STX18Q9P2W9 335 aaKnown RBP13.94□□□□□ -0.18
HLCS-201ENST00000336648 PCDHB6Q9Y5E3 794 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 ACSL3O95573 720 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 UBXN2AP68543 259 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 MAP3K10Q02779 954 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 SLITRK6Q9H5Y7 841 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 DTNBO60941 627 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 PHKA2P46019 1235 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 KRT76Q01546 638 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 CDKL3Q8IVW4 592 aaPredicted RBP13.93□□□□□ -0.18
HLCS-201ENST00000336648 SFMBT1Q9UHJ3 866 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 HPCAL4Q9UM19 191 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 CCDC22O60826 627 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 SFNP31947 248 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 OR6B3Q8NGW1 331 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 TTC17Q96AE7 1141 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 MRGBPQ9NV56 204 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.93□□□□□ -0.18
HLCS-201ENST00000336648 SENP1Q9P0U3 644 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 IP6K2Q9UHH9 426 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 ANAPC7Q9UJX3 599 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 TSC22D4Q9Y3Q8 395 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 WDR91A4D1P6 747 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 AARSP49588 968 aaKnown RBP eCLIP13.93□□□□□ -0.18
HLCS-201ENST00000336648 PRELPP51888 382 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 GRAMD1CQ8IYS0 662 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 NGRNQ9NPE2 291 aaKnown RBP13.93□□□□□ -0.18
HLCS-201ENST00000336648 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.93□□□□□ -0.18
HLCS-201ENST00000336648 A0A0G2JND7 137 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 RASSF10A6NK89 507 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 SLC16A2P36021 539 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 CCDC85BQ15834 202 aaPredicted RBP13.93□□□□□ -0.18
HLCS-201ENST00000336648 RNF219Q5W0B1 726 aaPredicted RBP13.93□□□□□ -0.18
HLCS-201ENST00000336648 LZICQ8WZA0 190 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 HSPH1Q92598 858 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 EEF2KMTQ96G04 330 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 FSD1LQ9BXM9 530 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 ZWILCHQ9H900 591 aa13.93□□□□□ -0.18
HLCS-201ENST00000336648 ASNSP08243 561 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 ZNF18P17022 549 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 IRX1P78414 480 aaPredicted RBP13.92□□□□□ -0.18
HLCS-201ENST00000336648 CCDC15Q0P6D6 951 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 STX19Q8N4C7 294 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 HINFPQ9BQA5 517 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 WNT8AQ9H1J5 351 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 BHMT2Q9H2M3 363 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 PDHA1P08559 390 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 CDK8P49336 464 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 PTK2BQ14289 1009 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 TTLL11Q8NHH1 800 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 IFT43Q96FT9 208 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 BTBD6Q96KE9 485 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 ABHD10Q9NUJ1 306 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 BSDC1Q9NW68 430 aaPredicted RBP13.92□□□□□ -0.18
HLCS-201ENST00000336648 MYO3BQ8WXR4 1341 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 PALMO75781 387 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 CYP27A1Q02318 531 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 RTKN2Q8IZC4 609 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 BEST2Q8NFU1 509 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 OSBP2Q969R2 916 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 TRIM8Q9BZR9 551 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 MYO1DO94832 1006 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 TSPY1Q01534 308 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 NECTIN1Q15223 517 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 MAPK6Q16659 721 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 MMTAG2Q9BU76 263 aaKnown RBP13.92□□□□□ -0.18
HLCS-201ENST00000336648 TLR7Q9NYK1 1049 aaKnown RBP13.92□□□□□ -0.18
HLCS-201ENST00000336648 ANP32DO95626 131 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 NR3C1P04150 777 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 PMS2P54278 862 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 PPP2R2AP63151 447 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 GRAPQ13588 217 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 EFTUD2Q15029 972 aaKnown RBP eCLIP13.92□□□□□ -0.18
HLCS-201ENST00000336648 TTC23LQ6PF05 361 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 FAM196AQ6ZSG2 479 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 CATSPER4Q7RTX7 472 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 EFHBQ8N7U6 833 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 CDC26Q8NHZ8 85 aa13.92□□□□□ -0.18
HLCS-201ENST00000336648 GRAPLQ8TC17 118 aaPredicted RBP13.92□□□□□ -0.18
HLCS-201ENST00000336648 CLRN2A0PK11 232 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 GDF11O95390 407 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 FDX1P10109 184 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 GRIN1Q05586 938 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 NLRP10Q86W26 655 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 ULK4Q96C45 1275 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 USP17L3A6NCW0 530 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 USP17L4A6NCW7 530 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 PRR23D1E9PI22 279 aaPredicted RBP13.91□□□□□ -0.18
HLCS-201ENST00000336648 CLDN3O15551 220 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 NBNO60934 754 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 COBLO75128 1261 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 PRR23D2P0DMB1 279 aaPredicted RBP13.91□□□□□ -0.18
HLCS-201ENST00000336648 MED21Q13503 144 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 IMPG1Q17R60 797 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 CAPRIN2Q6IMN6 1127 aaKnown RBP13.91□□□□□ -0.18
HLCS-201ENST00000336648 RWDD4Q6NW29 188 aaKnown RBP13.91□□□□□ -0.18
HLCS-201ENST00000336648 USP17L2Q6R6M4 530 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 USP17L1Q7RTZ2 530 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 PATL1Q86TB9 770 aaKnown RBP13.91□□□□□ -0.18
HLCS-201ENST00000336648 LZTS1Q9Y250 596 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms