RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PPP3CAQ08209 521 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 LLGL1Q15334 1064 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 FIGNQ5HY92 759 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 GJC2Q5T442 439 aaPredicted RBP13.73□□□□□ -0.21
LIMK1-201ENST00000336180 TMCO3Q6UWJ1 677 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 FRMD5Q7Z6J6 570 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 PHLDB2Q86SQ0 1253 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 NSUN6Q8TEA1 469 aaKnown RBP13.73□□□□□ -0.21
LIMK1-201ENST00000336180 U2AF1L4Q8WU68 220 aaKnown RBP13.73□□□□□ -0.21
LIMK1-201ENST00000336180 SPON1Q9HCB6 807 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 LARSQ9P2J5 1176 aaKnown RBP13.73□□□□□ -0.21
LIMK1-201ENST00000336180 ADGRA3Q8IWK6 1321 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 DENND3A2RUS2 1198 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 PALMO75781 387 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 FMO5P49326 533 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 ACTR2P61160 394 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 LY6KQ17RY6 165 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 SUPT20HL1Q3ZLR7 823 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 TXNRD2Q9NNW7 524 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 DNAJC12Q9UKB3 198 aa13.73□□□□□ -0.21
LIMK1-201ENST00000336180 LOC102724159A0A0B4J2E5 919 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 ADRB2P07550 413 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 PSMC5P62195 406 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 PRKCEQ02156 737 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 PWP2Q15269 919 aaKnown RBP13.72□□□□□ -0.21
LIMK1-201ENST00000336180 Q3C1V9 767 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 GLYCTKQ8IVS8 523 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 BICD1Q96G01 975 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 SYT17Q9BSW7 474 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 PI4K2AQ9BTU6 479 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 JPH1Q9HDC5 661 aaPredicted RBP13.72□□□□□ -0.21
LIMK1-201ENST00000336180 SERPING1P05155 500 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 KCNA2P16389 499 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 NPTX2P47972 431 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 DRAP1Q14919 205 aaPredicted RBP13.72□□□□□ -0.21
LIMK1-201ENST00000336180 SCARA3Q6AZY7 606 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 DPY19L2P1Q6NXN4 242 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 PPP4R3CPQ6ZMV5 832 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 TRAPPC11Q7Z392 1133 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 ARHGEF19Q8IW93 802 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 HDAC7Q8WUI4 952 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 MOV10L1Q9BXT6 1211 aaKnown RBP13.72□□□□□ -0.21
LIMK1-201ENST00000336180 TBC1D22BQ9NU19 505 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 PCDHA10Q9Y5I2 948 aa13.72□□□□□ -0.21
LIMK1-201ENST00000336180 TUBB4AP04350 444 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 CYP2C8P10632 490 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 ZNF131P52739 623 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 MYL7Q01449 175 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 PPARDQ03181 441 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 ASTE1Q2TB18 679 aaPredicted RBP13.71□□□□□ -0.21
LIMK1-201ENST00000336180 IRF2BP2Q7Z5L9 587 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 CDR2LQ86X02 465 aaPredicted RBP13.71□□□□□ -0.21
LIMK1-201ENST00000336180 COPS5Q92905 334 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 TAS2R14Q9NYV8 317 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 HSPBP1Q9NZL4 362 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 FAM184BQ9ULE4 1060 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 PLS3P13797 630 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 DRP2Q13474 957 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 EPC2Q52LR7 807 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 TMEM130Q8N3G9 435 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 SLC20A1Q8WUM9 679 aa13.71□□□□□ -0.21
LIMK1-201ENST00000336180 INTS2Q9H0H0 1204 aaKnown RBP13.71□□□□□ -0.21
LIMK1-201ENST00000336180 DDX41Q9UJV9 622 aaKnown RBP13.71□□□□□ -0.21
LIMK1-201ENST00000336180 KIF13BQ9NQT8 1826 aa13.71□□□□□ -0.22
LIMK1-201ENST00000336180 PFASO15067 1338 aa13.71□□□□□ -0.22
LIMK1-201ENST00000336180 LTBP3Q9NS15 1303 aa13.71□□□□□ -0.22
LIMK1-201ENST00000336180 PPP1R12BO60237 982 aaPredicted RBP13.71□□□□□ -0.22
LIMK1-201ENST00000336180 TACC1O75410 805 aa13.71□□□□□ -0.22
LIMK1-201ENST00000336180 GJB1P08034 283 aa13.71□□□□□ -0.22
LIMK1-201ENST00000336180 BCRP11274 1271 aa13.71□□□□□ -0.22
LIMK1-201ENST00000336180 GUCY2CP25092 1073 aa13.71□□□□□ -0.22
LIMK1-201ENST00000336180 BMT2Q1RMZ1 405 aa13.71□□□□□ -0.22
LIMK1-201ENST00000336180 PHLDB3Q6NSJ2 640 aa13.71□□□□□ -0.22
LIMK1-201ENST00000336180 BORCS6Q96GS4 357 aa13.71□□□□□ -0.22
LIMK1-201ENST00000336180 ZBTB45Q96K62 511 aaPredicted RBP13.71□□□□□ -0.22
LIMK1-201ENST00000336180 ABCB6Q9NP58 842 aa13.71□□□□□ -0.22
LIMK1-201ENST00000336180 UBE2TQ9NPD8 197 aaPredicted RBP13.71□□□□□ -0.22
LIMK1-201ENST00000336180 KMT5AQ9NQR1 393 aa13.71□□□□□ -0.22
LIMK1-201ENST00000336180 SLC9A2Q9UBY0 812 aa13.71□□□□□ -0.22
LIMK1-201ENST00000336180 COL11A1P12107 1806 aaPredicted RBP13.71□□□□□ -0.22
LIMK1-201ENST00000336180 EVI5O60447 810 aa13.7□□□□□ -0.22
LIMK1-201ENST00000336180 ADSSP30520 456 aa13.7□□□□□ -0.22
LIMK1-201ENST00000336180 MTERF4Q7Z6M4 381 aaKnown RBP13.7□□□□□ -0.22
LIMK1-201ENST00000336180 CCDC125Q86Z20 511 aa13.7□□□□□ -0.22
LIMK1-201ENST00000336180 BRCA1P38398 1863 aaKnown RBP13.7□□□□□ -0.22
LIMK1-201ENST00000336180 CSDE1O75534 798 aaKnown RBP13.7□□□□□ -0.22
LIMK1-201ENST00000336180 HNRNPH3P31942 346 aaKnown RBP13.7□□□□□ -0.22
LIMK1-201ENST00000336180 MARSP56192 900 aaKnown RBP13.7□□□□□ -0.22
LIMK1-201ENST00000336180 BFSP1Q12934 665 aa13.7□□□□□ -0.22
LIMK1-201ENST00000336180 CC2D1AQ6P1N0 951 aaPredicted RBP13.7□□□□□ -0.22
LIMK1-201ENST00000336180 ADAT2Q7Z6V5 191 aaKnown RBP13.7□□□□□ -0.22
LIMK1-201ENST00000336180 ZC3H3Q8IXZ2 948 aaKnown RBP13.7□□□□□ -0.22
LIMK1-201ENST00000336180 TRAPPC12Q8WVT3 735 aa13.7□□□□□ -0.22
LIMK1-201ENST00000336180 DHX38Q92620 1227 aaKnown RBP13.7□□□□□ -0.22
LIMK1-201ENST00000336180 HOXC10Q9NYD6 342 aa13.7□□□□□ -0.22
LIMK1-201ENST00000336180 ODF2LQ9ULJ1 636 aa13.7□□□□□ -0.22
LIMK1-201ENST00000336180 FOXN3O00409 490 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-201ENST00000336180 MAP1SQ66K74 1059 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-201ENST00000336180 CEP112Q8N8E3 955 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms