RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 C1orf131Q8NDD1 294 aaKnown RBP12□□□□□ -0.49
CCDC87-201ENST00000333861 CCHCR1Q8TD31 782 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 ITFG2Q969R8 447 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 FAM84BQ96KN1 310 aaPredicted RBP12□□□□□ -0.49
CCDC87-201ENST00000333861 C7orf25Q9BPX7 421 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 DDX50Q9BQ39 737 aaKnown RBP12□□□□□ -0.49
CCDC87-201ENST00000333861 CNTNAP4Q9C0A0 1308 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 CCSER1Q9C0I3 900 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 RPS6KL1Q9Y6S9 549 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 ASAP2O43150 1006 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 AHCYL1O43865 530 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 HIP1RO75146 1068 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 ALADP13716 330 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 PSMC6P62333 389 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 CYP4A11Q02928 519 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 NONOQ15233 471 aaKnown RBP eCLIP12□□□□□ -0.49
CCDC87-201ENST00000333861 FIGNQ5HY92 759 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 TRAPPC3LQ5T215 181 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
CCDC87-201ENST00000333861 ISLR2Q6UXK2 745 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 PROM2Q8N271 834 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 ATP8B4Q8TF62 1192 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 KRT35Q92764 455 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 TMEM165Q9HC07 324 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 PCMTD2Q9NV79 361 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 RNF14Q9UBS8 474 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 RNF8O76064 485 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 DDAH1O94760 285 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 PMS2P54278 862 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 MGAT5Q09328 741 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 ITIH4Q14624 930 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 ZC2HC1CQ53FD0 456 aaPredicted RBP12□□□□□ -0.49
CCDC87-201ENST00000333861 DENND2CQ68D51 928 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 TRIM74Q86UV6 250 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 TRIM73Q86UV7 250 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 MYOCDQ8IZQ8 938 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 P3H4Q92791 437 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 BUD13Q9BRD0 619 aaKnown RBP eCLIP12□□□□□ -0.49
CCDC87-201ENST00000333861 BMP2KQ9NSY1 1161 aaPredicted RBP12□□□□□ -0.49
CCDC87-201ENST00000333861 HAO1Q9UJM8 370 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 USP15Q9Y4E8 981 aaPredicted RBP12□□□□□ -0.49
CCDC87-201ENST00000333861 hCG_2014768A0A024R1R8 64 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 EDIL3O43854 480 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 GSTA1P08263 222 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 CALML3P27482 149 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 MMP13P45452 471 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 MTMR3Q13615 1198 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 ERFEQ4G0M1 354 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 C2CD6Q53TS8 623 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 NEK8Q86SG6 692 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 TAB3Q8N5C8 712 aaPredicted RBP11.99□□□□□ -0.49
CCDC87-201ENST00000333861 TPCN2Q8NHX9 752 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 NSUN4Q96CB9 384 aaKnown RBP11.99□□□□□ -0.49
CCDC87-201ENST00000333861 TRIM4Q9C037 500 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 UBE2OQ9C0C9 1292 aaKnown RBP11.99□□□□□ -0.49
CCDC87-201ENST00000333861 CNOT10Q9H9A5 744 aaKnown RBP11.99□□□□□ -0.49
CCDC87-201ENST00000333861 POTEFA5A3E0 1075 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 M0R2N6 131 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 ZBTB39O15060 712 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 POTEIP0CG38 1075 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 CNGA1P29973 690 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 SLC5A9Q2M3M2 681 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 TTBK2Q6IQ55 1244 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 POTEGQ6S5H5 508 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 POTEEQ6S8J3 1075 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 NSMFQ6X4W1 530 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 CCDC84Q86UT8 332 aaPredicted RBP11.99□□□□□ -0.49
CCDC87-201ENST00000333861 CCNJLQ8IV13 435 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 ZDHHC14Q8IZN3 488 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 PBKQ96KB5 322 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 NAGPAQ9UK23 515 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 INTUQ9ULD6 942 aa11.99□□□□□ -0.49
CCDC87-201ENST00000333861 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCDC87-201ENST00000333861 RBAK-RBAKDNI3L0D1 243 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 CALM1P0DP23 149 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 CALM2P0DP24 149 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 CALM3P0DP25 149 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 FERP16591 822 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 NR2F2P24468 414 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 TRAPPC10P48553 1259 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 USP11P51784 963 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 GALCP54803 685 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 BNIP1Q12981 228 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 PABPC4Q13310 644 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCDC87-201ENST00000333861 COG2Q14746 738 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 RC3H1Q5TC82 1133 aaKnown RBP11.98□□□□□ -0.49
CCDC87-201ENST00000333861 ANKLE1Q8NAG6 615 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 ALG3Q92685 438 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 RPGRQ92834 1020 aaKnown RBP11.98□□□□□ -0.49
CCDC87-201ENST00000333861 ZNF512BQ96KM6 892 aaPredicted RBP11.98□□□□□ -0.49
CCDC87-201ENST00000333861 TSG101Q99816 390 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 USP40Q9NVE5 1235 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 CEP72Q9P209 647 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 DDX3XO00571 662 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCDC87-201ENST00000333861 SPAG7O75391 227 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 SSTR3P32745 418 aaPredicted RBP11.98□□□□□ -0.49
CCDC87-201ENST00000333861 PRPHP41219 470 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 ROR2Q01974 943 aaKnown RBP11.98□□□□□ -0.49
CCDC87-201ENST00000333861 MPP2Q14168 576 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 CNGA2Q16280 664 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms