RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 GDAP1Q8TB36 358 aa13.98□□□□□ -0.17
VSTM4-202ENST00000332853 SEL1LQ9UBV2 794 aa13.98□□□□□ -0.17
VSTM4-202ENST00000332853 ABT1Q9ULW3 272 aaKnown RBP13.98□□□□□ -0.17
VSTM4-202ENST00000332853 PCDHA10Q9Y5I2 948 aa13.98□□□□□ -0.17
VSTM4-202ENST00000332853 CD44P16070 742 aaKnown RBP13.98□□□□□ -0.17
VSTM4-202ENST00000332853 TAL1P17542 331 aaPredicted RBP13.98□□□□□ -0.17
VSTM4-202ENST00000332853 PPP4CP60510 307 aa13.98□□□□□ -0.17
VSTM4-202ENST00000332853 PLAAQ9Y263 795 aa13.98□□□□□ -0.17
VSTM4-202ENST00000332853 BCL9O00512 1426 aa13.98□□□□□ -0.17
VSTM4-202ENST00000332853 INHBAP08476 426 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 SLC10A5Q5PT55 438 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 MS4A14Q96JA4 679 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 SRGNP10124 158 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 GPC3P51654 580 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 FRMD5Q7Z6J6 570 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 CFAP36Q96G28 342 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 NBPF3Q9H094 633 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 JPH1Q9HDC5 661 aaPredicted RBP13.97□□□□□ -0.17
VSTM4-202ENST00000332853 IFT88Q13099 833 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 SURF1Q15526 300 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 RAD9BQ6WBX8 426 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 PDZD4Q76G19 769 aaPredicted RBP13.97□□□□□ -0.17
VSTM4-202ENST00000332853 ZNF564Q8TBZ8 553 aaPredicted RBP13.97□□□□□ -0.17
VSTM4-202ENST00000332853 TMEM143Q96AN5 459 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 ECE1P42892 770 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 SEC23AQ15436 765 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 PRMT6Q96LA8 375 aaPredicted RBP13.97□□□□□ -0.17
VSTM4-202ENST00000332853 VCPKMTQ9H867 229 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 MYOZ2Q9NPC6 264 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 GIMAP8Q8ND71 665 aaPredicted RBP13.97□□□□□ -0.17
VSTM4-202ENST00000332853 GABPB2Q8TAK5 448 aaPredicted RBP13.97□□□□□ -0.17
VSTM4-202ENST00000332853 LRRC8CQ8TDW0 803 aa13.97□□□□□ -0.17
VSTM4-202ENST00000332853 DDX47Q9H0S4 455 aaKnown RBP13.97□□□□□ -0.17
VSTM4-202ENST00000332853 SOX5P35711 763 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 RNASELQ05823 741 aaKnown RBP13.96□□□□□ -0.17
VSTM4-202ENST00000332853 LRRC4Q9HBW1 653 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 STYK1Q6J9G0 422 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 PPFIBP2Q8ND30 876 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 FAM151AQ8WW52 585 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 PSPC1Q8WXF1 523 aaKnown RBP13.96□□□□□ -0.17
VSTM4-202ENST00000332853 SLC4A9Q96Q91 983 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 FBXO28Q9NVF7 368 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 UBR1Q8IWV7 1749 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 CYP26A1O43174 497 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 GYPCP04921 128 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 NTRK3Q16288 839 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 RSRC2Q7L4I2 434 aaKnown RBP13.96□□□□□ -0.17
VSTM4-202ENST00000332853 ABI1Q8IZP0 508 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 GPD1LQ8N335 351 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 WHAMMQ8TF30 809 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 KRT39Q6A163 491 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 NXNQ6DKJ4 435 aa13.96□□□□□ -0.17
VSTM4-202ENST00000332853 NGRNQ9NPE2 291 aaKnown RBP13.96□□□□□ -0.17
VSTM4-202ENST00000332853 RBAKQ9NYW8 714 aaPredicted RBP13.96□□□□□ -0.17
VSTM4-202ENST00000332853 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.96□□□□□ -0.18
VSTM4-202ENST00000332853 PDXKO00764 312 aa13.96□□□□□ -0.18
VSTM4-202ENST00000332853 GNA15P30679 374 aa13.96□□□□□ -0.18
VSTM4-202ENST00000332853 GGCXP38435 758 aa13.96□□□□□ -0.18
VSTM4-202ENST00000332853 NAA25Q14CX7 972 aa13.96□□□□□ -0.18
VSTM4-202ENST00000332853 RNF25Q96BH1 459 aaPredicted RBP13.96□□□□□ -0.18
VSTM4-202ENST00000332853 SMYD2Q9NRG4 433 aa13.96□□□□□ -0.18
VSTM4-202ENST00000332853 METTL23Q86XA0 190 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 CATSPER3Q86XQ3 398 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 TACO1Q9BSH4 297 aaKnown RBP13.95□□□□□ -0.18
VSTM4-202ENST00000332853 FAM205AQ6ZU69 1335 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 WDR46O15213 610 aaKnown RBP13.95□□□□□ -0.18
VSTM4-202ENST00000332853 ACER1Q8TDN7 264 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 FAM167AQ96KS9 214 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 HSPBP1Q9NZL4 362 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 WDR91A4D1P6 747 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 GMPSP49915 693 aaPredicted RBP13.95□□□□□ -0.18
VSTM4-202ENST00000332853 RSRC1Q96IZ7 334 aaKnown RBP13.95□□□□□ -0.18
VSTM4-202ENST00000332853 AGO2Q9UKV8 859 aaKnown RBP13.95□□□□□ -0.18
VSTM4-202ENST00000332853 ANO9A1A5B4 782 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 GOLGA8MH3BSY2 632 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 GIPC1O14908 333 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 ACOT2P49753 483 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 TTLL4Q14679 1199 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 COG2Q14746 738 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 PSMD6Q15008 389 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 SIX6OS1Q8N1H7 587 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 ZNF280CQ8ND82 737 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 PPP4R1Q8TF05 950 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 AP5Z1O43299 807 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 CTNND1O60716 968 aaKnown RBP13.95□□□□□ -0.18
VSTM4-202ENST00000332853 CPP00450 1065 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 OATP04181 439 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 PCK1P35558 622 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 PKN1Q16512 942 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 BBS9Q3SYG4 887 aa13.95□□□□□ -0.18
VSTM4-202ENST00000332853 PPP6R3Q5H9R7 873 aaPredicted RBP13.95□□□□□ -0.18
VSTM4-202ENST00000332853 EARS2Q5JPH6 523 aaKnown RBP13.95□□□□□ -0.18
VSTM4-202ENST00000332853 HSPA6P17066 643 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 NR1D1P20393 614 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 C2orf69Q8N8R5 385 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 KIAA1586Q9HCI6 787 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 SMARCAL1Q9NZC9 954 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 SCINQ9Y6U3 715 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 SMIM22K7EJ46 135 aa13.94□□□□□ -0.18
VSTM4-202ENST00000332853 SLC9A1P19634 815 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms