RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 KSR1Q8IVT5 923 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 SH3TC2Q8TF17 1288 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 LMBR1Q8WVP7 490 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 TCP11Q8WWU5 503 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 IFT74Q96LB3 600 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 HMX1Q9NP08 348 aaPredicted RBP13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 KMT5AQ9NQR1 393 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 ARHGAP28Q9P2N2 729 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 PCDHB13Q9Y5F0 798 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 NRCAMQ92823 1304 aa13.31□□□□□ -0.28
TRIM49B-201ENST00000332682 ZEB2O60315 1214 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 NAMPTP43490 491 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 CLCN3P51790 818 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 CHMP4BP1P59074 171 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 CAPSQ13938 189 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 PPP2R5AQ15172 486 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 TPD52L1Q16890 204 aaPredicted RBP13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 HSP90AA4PQ58FG1 418 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 LHX8Q68G74 356 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 EFCAB12Q6NXP0 572 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 SARM1Q6SZW1 724 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 MTHFD1LQ6UB35 978 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 CXCL17Q6UXB2 119 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 LRRC55Q6ZSA7 311 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 CSGALNACT2Q8N6G5 542 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 RETREG2Q8NC44 543 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 PPP1R13LQ8WUF5 828 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 PRPF31Q8WWY3 499 aaKnown RBP13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 PSPC1Q8WXF1 523 aaKnown RBP13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 KCNN1Q92952 543 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 MTG1Q9BT17 334 aaPredicted RBP13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 SETD4Q9NVD3 440 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 TRAF3IP3Q9Y228 551 aa13.3□□□□□ -0.28
TRIM49B-201ENST00000332682 DENND3A2RUS2 1198 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 MBLAC1A4D2B0 266 aaPredicted RBP13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 RRN3P2A6NIE6 340 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 PDXKO00764 312 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 TGFB1I1O43294 461 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 HSPA8P11142 646 aaKnown RBP13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 HOXC8P31273 242 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 ADAM17P78536 824 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 PLCB2Q00722 1185 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 HIC1Q14526 733 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 MXD4Q14582 209 aaPredicted RBP13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 EDRF1Q3B7T1 1238 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 IRF2BP1Q8IU81 584 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 METTL13Q8N6R0 699 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 HVCN1Q96D96 273 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 TSG101Q99816 390 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 IKZF4Q9H2S9 585 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 TYW1Q9NV66 732 aaKnown RBP13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 SUCLA2Q9P2R7 463 aaPredicted RBP13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 KCNG1Q9UIX4 513 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 TRIP12Q14669 1992 aaPredicted RBP13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 LRRIQ4A6NIV6 560 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 H0YCG3 227 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 ASGR1P07306 291 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 GJB1P08034 283 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 DNM2P50570 870 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 LAMTOR4Q0VGL1 99 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 KCNA10Q16322 511 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 NFRKBQ6P4R8 1299 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 TAS1R3Q7RTX0 852 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 MAP4K3Q8IVH8 894 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 ZC3H3Q8IXZ2 948 aaKnown RBP13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 PCSK9Q8NBP7 692 aaKnown RBP13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 DEPTORQ8TB45 409 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 NOC3LQ8WTT2 800 aaKnown RBP13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 EEF2KMTQ96G04 330 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 ACCSQ96QU6 501 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 SRRTQ9BXP5 876 aaKnown RBP13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 GBP3Q9H0R5 595 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 THAP9Q9H5L6 903 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 TMEM206Q9H813 350 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 TBX20Q9UMR3 447 aa13.29□□□□□ -0.28
TRIM49B-201ENST00000332682 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
TRIM49B-201ENST00000332682 SCP2P22307 547 aa13.28□□□□□ -0.28
TRIM49B-201ENST00000332682 TMOD1P28289 359 aa13.28□□□□□ -0.28
TRIM49B-201ENST00000332682 FANCCQ00597 558 aa13.28□□□□□ -0.28
TRIM49B-201ENST00000332682 FKBP3Q00688 224 aaKnown RBP13.28□□□□□ -0.28
TRIM49B-201ENST00000332682 SLC9C1Q4G0N8 1177 aa13.28□□□□□ -0.28
TRIM49B-201ENST00000332682 CDCA2Q69YH5 1023 aaPredicted RBP13.28□□□□□ -0.28
TRIM49B-201ENST00000332682 RNF180Q86T96 592 aa13.28□□□□□ -0.28
TRIM49B-201ENST00000332682 RHPN2Q8IUC4 686 aa13.28□□□□□ -0.28
TRIM49B-201ENST00000332682 C7orf31Q8N865 590 aa13.28□□□□□ -0.28
TRIM49B-201ENST00000332682 UNC93B1Q9H1C4 597 aa13.28□□□□□ -0.28
TRIM49B-201ENST00000332682 HDAC6Q9UBN7 1215 aa13.28□□□□□ -0.28
TRIM49B-201ENST00000332682 PHLPP2Q6ZVD8 1323 aa13.27□□□□□ -0.28
TRIM49B-201ENST00000332682 KCNJ18B7U540 433 aa13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 CALUO43852 315 aaPredicted RBP13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 ADCY5O95622 1261 aa13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 NR3C1P04150 777 aa13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 ABCD1P33897 745 aa13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 SPAG1Q07617 926 aa13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 KCNJ12Q14500 433 aa13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 NFIL3Q16649 462 aa13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 NBPF20Q3BBV1 942 aa13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 HS2ST1Q7LGA3 356 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms