RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 LIG1P18858 919 aa17.77■□□□□ 0.44
LRRC28-202ENST00000331450 CACNB1Q02641 598 aaPredicted RBP17.77■□□□□ 0.44
LRRC28-202ENST00000331450 POU5F1BQ06416 359 aa17.77■□□□□ 0.44
LRRC28-202ENST00000331450 LPIN1Q14693 890 aa17.77■□□□□ 0.44
LRRC28-202ENST00000331450 KRBA2Q6ZNG9 492 aa17.77■□□□□ 0.44
LRRC28-202ENST00000331450 TMEM199Q8N511 208 aa17.77■□□□□ 0.44
LRRC28-202ENST00000331450 ZNF668Q96K58 619 aaPredicted RBP17.77■□□□□ 0.44
LRRC28-202ENST00000331450 NLRP4Q96MN2 994 aa17.77■□□□□ 0.44
LRRC28-202ENST00000331450 OSMRQ99650 979 aa17.77■□□□□ 0.44
LRRC28-202ENST00000331450 FDXACB1Q9BRP7 624 aaPredicted RBP17.77■□□□□ 0.44
LRRC28-202ENST00000331450 TRIM9Q9C026 710 aa17.77■□□□□ 0.44
LRRC28-202ENST00000331450 C17orf75Q9HAS0 396 aa17.77■□□□□ 0.44
LRRC28-202ENST00000331450 POLD4Q9HCU8 107 aa17.77■□□□□ 0.44
LRRC28-202ENST00000331450 LMBRD1Q9NUN5 540 aa17.77■□□□□ 0.44
LRRC28-202ENST00000331450 H0YGN5 161 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 RBAK-RBAKDNI3L0D1 243 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 NR1I2O75469 434 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 DARSP14868 501 aaKnown RBP17.76■□□□□ 0.43
LRRC28-202ENST00000331450 NAMPTP43490 491 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 FPGSQ05932 587 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 PPP2R5AQ15172 486 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 CDCA2Q69YH5 1023 aaPredicted RBP17.76■□□□□ 0.43
LRRC28-202ENST00000331450 TSHZ1Q6ZSZ6 1077 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 DYMQ7RTS9 669 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 CEP57L1Q8IYX8 460 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 USP38Q8NB14 1042 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 RNF149Q8NC42 400 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 NLRP7Q8WX94 980 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 NFKBIZQ9BYH8 718 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 LRRC27Q9C0I9 530 aa17.76■□□□□ 0.43
LRRC28-202ENST00000331450 ADGRA3Q8IWK6 1321 aa17.75■□□□□ 0.43
LRRC28-202ENST00000331450 FRMD3A2A2Y4 597 aa17.75■□□□□ 0.43
LRRC28-202ENST00000331450 GHRP10912 638 aa17.75■□□□□ 0.43
LRRC28-202ENST00000331450 EIF4BP23588 611 aaKnown RBP17.75■□□□□ 0.43
LRRC28-202ENST00000331450 MAGEA10P43363 369 aaPredicted RBP17.75■□□□□ 0.43
LRRC28-202ENST00000331450 PTENP60484 403 aa17.75■□□□□ 0.43
LRRC28-202ENST00000331450 PPIGQ13427 754 aaKnown RBP eCLIP17.75■□□□□ 0.43
LRRC28-202ENST00000331450 TFDP1Q14186 410 aa17.75■□□□□ 0.43
LRRC28-202ENST00000331450 PLEKHG4Q58EX7 1191 aa17.75■□□□□ 0.43
LRRC28-202ENST00000331450 GRAMD1CQ8IYS0 662 aa17.75■□□□□ 0.43
LRRC28-202ENST00000331450 PAGE5Q96GU1 130 aa17.75■□□□□ 0.43
LRRC28-202ENST00000331450 TIGD1Q96MW7 591 aa17.75■□□□□ 0.43
LRRC28-202ENST00000331450 C7orf25Q9BPX7 421 aa17.75■□□□□ 0.43
LRRC28-202ENST00000331450 AGO3Q9H9G7 860 aaKnown RBP17.75■□□□□ 0.43
LRRC28-202ENST00000331450 IL23AQ9NPF7 189 aa17.75■□□□□ 0.43
LRRC28-202ENST00000331450 GINS2Q9Y248 185 aa17.75■□□□□ 0.43
LRRC28-202ENST00000331450 NOC2LQ9Y3T9 749 aaKnown RBP17.75■□□□□ 0.43
LRRC28-202ENST00000331450 SFI1A8K8P3 1242 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 KRT18P05783 430 aaKnown RBP17.74■□□□□ 0.43
LRRC28-202ENST00000331450 PFKMP08237 780 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 SRGAP2CP0DJJ0 459 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 PLS3P13797 630 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 AFMP43652 599 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 PHKA2P46019 1235 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 NPTX2P47972 431 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 EPHB4P54760 987 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 MDM2Q00987 491 aaPredicted RBP17.74■□□□□ 0.43
LRRC28-202ENST00000331450 AMPD3Q01432 767 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 C16orf59Q7L2K0 433 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 SRGAP1Q7Z6B7 1085 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 FAM228AQ86W67 206 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 CNNM3Q8NE01 707 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 SCLT1Q96NL6 688 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 FIZ1Q96SL8 496 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 GDF15Q99988 308 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 LBHD1Q9BQE6 289 aaPredicted RBP17.74■□□□□ 0.43
LRRC28-202ENST00000331450 NTPCRQ9BSD7 190 aaKnown RBP17.74■□□□□ 0.43
LRRC28-202ENST00000331450 GCOM2Q9BZD3 368 aaPredicted RBP17.74■□□□□ 0.43
LRRC28-202ENST00000331450 MINDY3Q9H8M7 445 aa17.74■□□□□ 0.43
LRRC28-202ENST00000331450 PDE4DIPQ5VU43 2346 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 LRRIQ4A6NIV6 560 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 TBCAO75347 108 aaKnown RBP17.73■□□□□ 0.43
LRRC28-202ENST00000331450 FAM13AO94988 1023 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 MYL1P05976 194 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 CASP1P29466 404 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 NCKAP1LP55160 1127 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 PEX3P56589 373 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 DMP1Q13316 513 aaPredicted RBP17.73■□□□□ 0.43
LRRC28-202ENST00000331450 TCTN1Q2MV58 587 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 DEFB128Q7Z7B8 93 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 SPIRE2Q8WWL2 714 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 KCNN1Q92952 543 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 IFT74Q96LB3 600 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 IFIH1Q9BYX4 1025 aaKnown RBP17.73■□□□□ 0.43
LRRC28-202ENST00000331450 CCDC113Q9H0I3 377 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 PARVGQ9HBI0 331 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 ERVK-5Q9HDB9 667 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 LARSQ9P2J5 1176 aaKnown RBP17.73■□□□□ 0.43
LRRC28-202ENST00000331450 ARHGAP28Q9P2N2 729 aa17.73■□□□□ 0.43
LRRC28-202ENST00000331450 GOLGA6L22H0YM25 854 aa17.72■□□□□ 0.43
LRRC28-202ENST00000331450 GTPBP6O43824 516 aaPredicted RBP17.72■□□□□ 0.43
LRRC28-202ENST00000331450 RPS6KA5O75582 802 aa17.72■□□□□ 0.43
LRRC28-202ENST00000331450 CD52P31358 61 aa17.72■□□□□ 0.43
LRRC28-202ENST00000331450 MBTD1Q05BQ5 628 aa17.72■□□□□ 0.43
LRRC28-202ENST00000331450 EHHADHQ08426 723 aa17.72■□□□□ 0.43
LRRC28-202ENST00000331450 CUL4BQ13620 913 aa17.72■□□□□ 0.43
LRRC28-202ENST00000331450 SFR1Q86XK3 245 aa17.72■□□□□ 0.43
LRRC28-202ENST00000331450 RPUSD2Q8IZ73 545 aaKnown RBP17.72■□□□□ 0.43
LRRC28-202ENST00000331450 DBF4BQ8NFT6 615 aa17.72■□□□□ 0.43
LRRC28-202ENST00000331450 KIFC3Q9BVG8 833 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms