RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 A0A087WZ62 844 aa20.28■□□□□ 0.84
RAB28-202ENST00000330852 TMEM150BA6NC51 233 aa20.28■□□□□ 0.84
RAB28-202ENST00000330852 MBTPS2O43462 519 aa20.28■□□□□ 0.84
RAB28-202ENST00000330852 GPR37L1O60883 481 aa20.28■□□□□ 0.84
RAB28-202ENST00000330852 ALADP13716 330 aa20.28■□□□□ 0.84
RAB28-202ENST00000330852 IRS1P35568 1242 aa20.28■□□□□ 0.84
RAB28-202ENST00000330852 RFC5P40937 340 aa20.28■□□□□ 0.84
RAB28-202ENST00000330852 DLX2Q07687 328 aaPredicted RBP20.28■□□□□ 0.84
RAB28-202ENST00000330852 ZNF598Q86UK7 904 aaKnown RBP20.28■□□□□ 0.84
RAB28-202ENST00000330852 MICAL1Q8TDZ2 1067 aa20.28■□□□□ 0.84
RAB28-202ENST00000330852 ZNF668Q96K58 619 aaPredicted RBP20.28■□□□□ 0.84
RAB28-202ENST00000330852 FDXACB1Q9BRP7 624 aaPredicted RBP20.28■□□□□ 0.84
RAB28-202ENST00000330852 MRPL9Q9BYD2 267 aaKnown RBP20.28■□□□□ 0.84
RAB28-202ENST00000330852 TLE6Q9H808 572 aa20.28■□□□□ 0.84
RAB28-202ENST00000330852 C19orf67A6NJJ6 358 aa20.27■□□□□ 0.84
RAB28-202ENST00000330852 TBX10O75333 385 aa20.27■□□□□ 0.84
RAB28-202ENST00000330852 EYA4O95677 639 aa20.27■□□□□ 0.84
RAB28-202ENST00000330852 GTF2F1P35269 517 aaKnown RBP eCLIP20.27■□□□□ 0.84
RAB28-202ENST00000330852 NDUFV1P49821 464 aa20.27■□□□□ 0.84
RAB28-202ENST00000330852 ZP2Q05996 745 aa20.27■□□□□ 0.84
RAB28-202ENST00000330852 TMEM31Q5JXX7 168 aa20.27■□□□□ 0.84
RAB28-202ENST00000330852 RHPN2Q8IUC4 686 aa20.27■□□□□ 0.84
RAB28-202ENST00000330852 NECAB1Q8N987 351 aa20.27■□□□□ 0.84
RAB28-202ENST00000330852 MRPS27Q92552 414 aaKnown RBP20.27■□□□□ 0.84
RAB28-202ENST00000330852 TNFRSF25Q93038 417 aa20.27■□□□□ 0.84
RAB28-202ENST00000330852 MSLNLQ96KJ4 702 aa20.27■□□□□ 0.84
RAB28-202ENST00000330852 ZNF558Q96NG5 402 aa20.27■□□□□ 0.84
RAB28-202ENST00000330852 DHX33Q9H6R0 707 aaKnown RBP20.27■□□□□ 0.84
RAB28-202ENST00000330852 ZSWIM4Q9H7M6 989 aa20.27■□□□□ 0.84
RAB28-202ENST00000330852 KRT17Q04695 432 aa20.27■□□□□ 0.83
RAB28-202ENST00000330852 TRIM29Q14134 588 aa20.27■□□□□ 0.83
RAB28-202ENST00000330852 KCNT2Q6UVM3 1135 aa20.27■□□□□ 0.83
RAB28-202ENST00000330852 ADGRD2Q7Z7M1 963 aa20.27■□□□□ 0.83
RAB28-202ENST00000330852 NSUN7Q8NE18 718 aaKnown RBP20.27■□□□□ 0.83
RAB28-202ENST00000330852 CEP170P1Q96L14 293 aa20.27■□□□□ 0.83
RAB28-202ENST00000330852 SH2D3AQ9BRG2 576 aa20.27■□□□□ 0.83
RAB28-202ENST00000330852 ARID2Q68CP9 1835 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 ASAP2O43150 1006 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 NRIP1P48552 1158 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 RAB27AP51159 221 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 POLGP54098 1239 aaPredicted RBP20.26■□□□□ 0.83
RAB28-202ENST00000330852 SPIRE1Q08AE8 756 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 COASYQ13057 564 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 NR5A1Q13285 461 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 PLA2G4FQ68DD2 849 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 LRRC55Q6ZSA7 311 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 POTEDQ86YR6 584 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 TCP11Q8WWU5 503 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 LXNQ9BS40 222 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 NGRNQ9NPE2 291 aaKnown RBP20.26■□□□□ 0.83
RAB28-202ENST00000330852 SPG21Q9NZD8 308 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 COL4A3BPQ9Y5P4 624 aa20.26■□□□□ 0.83
RAB28-202ENST00000330852 FSCN2O14926 492 aa20.25■□□□□ 0.83
RAB28-202ENST00000330852 LINC01565O15544 149 aa20.25■□□□□ 0.83
RAB28-202ENST00000330852 ZNF623O75123 536 aa20.25■□□□□ 0.83
RAB28-202ENST00000330852 CSPG5O95196 566 aa20.25■□□□□ 0.83
RAB28-202ENST00000330852 FGFR4P22455 802 aa20.25■□□□□ 0.83
RAB28-202ENST00000330852 YWHABP31946 246 aaKnown RBP20.25■□□□□ 0.83
RAB28-202ENST00000330852 PHKA2P46019 1235 aa20.25■□□□□ 0.83
RAB28-202ENST00000330852 NPEPPSP55786 919 aa20.25■□□□□ 0.83
RAB28-202ENST00000330852 EARS2Q5JPH6 523 aaKnown RBP20.25■□□□□ 0.83
RAB28-202ENST00000330852 CLLU1OSQ5K130 101 aa20.25■□□□□ 0.83
RAB28-202ENST00000330852 SRGAP1Q7Z6B7 1085 aa20.25■□□□□ 0.83
RAB28-202ENST00000330852 RNF169Q8NCN4 708 aa20.25■□□□□ 0.83
RAB28-202ENST00000330852 PSPC1Q8WXF1 523 aaKnown RBP20.25■□□□□ 0.83
RAB28-202ENST00000330852 KHSRPQ92945 711 aaKnown RBP eCLIP20.25■□□□□ 0.834e-7■■■□□ 18.6
RAB28-202ENST00000330852 LRFN3Q9BTN0 628 aa20.25■□□□□ 0.83
RAB28-202ENST00000330852 PCDHA12Q9UN75 941 aa20.25■□□□□ 0.83
RAB28-202ENST00000330852 LARGE1O95461 756 aa20.24■□□□□ 0.83
RAB28-202ENST00000330852 ERVFC1P60507 584 aa20.24■□□□□ 0.83
RAB28-202ENST00000330852 TWF2Q6IBS0 349 aaKnown RBP20.24■□□□□ 0.83
RAB28-202ENST00000330852 NCAPH2Q6IBW4 605 aa20.24■□□□□ 0.83
RAB28-202ENST00000330852 CATSPER4Q7RTX7 472 aa20.24■□□□□ 0.83
RAB28-202ENST00000330852 NLRP4Q96MN2 994 aa20.24■□□□□ 0.83
RAB28-202ENST00000330852 IFT122Q9HBG6 1241 aa20.24■□□□□ 0.83
RAB28-202ENST00000330852 CLEC1BQ9P126 229 aa20.24■□□□□ 0.83
RAB28-202ENST00000330852 HCSTQ9UBK5 93 aa20.24■□□□□ 0.83
RAB28-202ENST00000330852 ARIH1Q9Y4X5 557 aaPredicted RBP20.24■□□□□ 0.83
RAB28-202ENST00000330852 CSDE1O75534 798 aaKnown RBP20.24■□□□□ 0.83
RAB28-202ENST00000330852 SRGAP2BP0DMP2 458 aa20.24■□□□□ 0.83
RAB28-202ENST00000330852 ATF7P17544 494 aaPredicted RBP20.24■□□□□ 0.83
RAB28-202ENST00000330852 PCBP1Q15365 356 aaKnown RBP eCLIP20.24■□□□□ 0.83
RAB28-202ENST00000330852 DUSP6Q16828 381 aa20.24■□□□□ 0.83
RAB28-202ENST00000330852 RBM23Q86U06 439 aaKnown RBP20.24■□□□□ 0.83
RAB28-202ENST00000330852 SMRP1Q8NCR6 262 aa20.24■□□□□ 0.83
RAB28-202ENST00000330852 WRAP73Q9P2S5 460 aaPredicted RBP20.24■□□□□ 0.83
RAB28-202ENST00000330852 PIN4Q9Y237 131 aaKnown RBP20.24■□□□□ 0.83
RAB28-202ENST00000330852 BTBD18B2RXH4 712 aa20.23■□□□□ 0.83
RAB28-202ENST00000330852 LYPLA2O95372 231 aa20.23■□□□□ 0.83
RAB28-202ENST00000330852 BMS1Q14692 1282 aaKnown RBP20.23■□□□□ 0.83
RAB28-202ENST00000330852 CLUL1Q15846 466 aa20.23■□□□□ 0.83
RAB28-202ENST00000330852 CALCRLQ16602 461 aa20.23■□□□□ 0.83
RAB28-202ENST00000330852 XKR9Q5GH70 373 aa20.23■□□□□ 0.83
RAB28-202ENST00000330852 TMEM184AQ6ZMB5 413 aa20.23■□□□□ 0.83
RAB28-202ENST00000330852 DIS3L2Q8IYB7 885 aaKnown RBP20.23■□□□□ 0.83
RAB28-202ENST00000330852 HELQQ8TDG4 1101 aa20.23■□□□□ 0.83
RAB28-202ENST00000330852 PRPF31Q8WWY3 499 aaKnown RBP20.23■□□□□ 0.83
RAB28-202ENST00000330852 DYDC2Q96IM9 177 aa20.23■□□□□ 0.83
RAB28-202ENST00000330852 FAM105AQ9NUU6 356 aa20.23■□□□□ 0.83
RAB28-202ENST00000330852 RGL1Q9NZL6 768 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms