RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 RERGLQ9H628 205 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 KMT5AQ9NQR1 393 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 TMEM161AQ9NX61 479 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 PLCH2O75038 1416 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 KPNA7A9QM74 516 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 SH2D3CQ8N5H7 860 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 MB21D1Q8N884 522 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 EME1Q96AY2 570 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 PCDHGA3Q9Y5H0 932 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 RGS12O14924 1447 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ARL4CP56559 192 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 TRIM63Q969Q1 353 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 MMTAG2Q9BU76 263 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 FSD1LQ9BXM9 530 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 EPN3Q9H201 632 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 EFCAB5A4FU69 1503 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 RNMTO43148 476 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 PUDPQ08623 228 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 MS4A14Q96JA4 679 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ATP6V1G3Q96LB4 118 aa13.56□□□□□ -0.24
RAB11FIP1-202ENST00000330843 MED7O43513 233 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 PDE8AO60658 829 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 NCAPHQ15003 741 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 WDR48Q8TAF3 677 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 M0R3G1 203 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 RGS5O15539 181 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 SKAP2O75563 359 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 FGAP02671 866 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 GNAT1P11488 350 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 USP33Q8TEY7 942 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 PRPF18Q99633 342 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 SEMA3DO95025 777 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 CLK1P49759 484 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 SFR1Q86XK3 245 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 LPIN2Q92539 896 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 UNC45AQ9H3U1 944 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 DAB2IPQ5VWQ8 1189 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 BNIPLQ7Z465 357 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 CATSPER1Q8NEC5 780 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ZC3H15Q8WU90 426 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 MOSPD1Q9UJG1 213 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ZNF185O15231 689 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 TRIM71Q2Q1W2 868 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 TM6SF1Q9BZW5 370 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 CUEDC2Q9H467 287 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 KLHL8Q9P2G9 620 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 TNKSO95271 1327 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 RRM2BQ7LG56 351 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 FBXO11Q86XK2 927 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 LSG1Q9H089 658 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ABHD10Q9NUJ1 306 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 MEFVO15553 781 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 RASSF9O75901 435 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 PAPOLAP51003 745 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ARHGAP17Q68EM7 881 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 RIN3Q8TB24 985 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 MCRS1Q96EZ8 462 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 LMCD1Q9NZU5 365 aa13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 DBR1Q9UK59 544 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ANKMY2Q8IV38 441 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 KIRREL3Q8IZU9 778 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 SIX6OS1Q8N1H7 587 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 PBXIP1Q96AQ6 731 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ZNF577Q9BSK1 485 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 EXOSC4Q9NPD3 245 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 SEL1LQ9UBV2 794 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 USP19O94966 1318 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 PHF20L1A8MW92 1017 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 GNPATO15228 680 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 LRRC74AQ0VAA2 488 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ZNF394Q53GI3 561 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 KCTD1Q719H9 257 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 PLBD2Q8NHP8 589 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 MARCOQ9UEW3 520 aaPredicted RBP13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 KRT72Q14CN4 511 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 CCDC80Q76M96 950 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ULK4Q96C45 1275 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 SLC12A6Q9UHW9 1150 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 IPPQ9Y573 584 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ARIH2O95376 493 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ZBED6P86452 979 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ZBED8Q8IZ13 594 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 ARHGEF1Q92888 912 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 LRRC4Q9HBW1 653 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 MFAP3LO75121 409 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 MAPRE1Q15691 268 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 CDC37Q16543 378 aaPredicted RBP13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 FASTKD1Q53R41 847 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 FAM210AQ96ND0 272 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 KCNG1Q9UIX4 513 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 SMARCA1P28370 1054 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 MKRN4PQ13434 485 aaPredicted RBP13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 TTC8Q8TAM2 541 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 USP40Q9NVE5 1235 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 HSPBP1Q9NZL4 362 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 WDR7Q9Y4E6 1490 aa13.54□□□□□ -0.24
RAB11FIP1-202ENST00000330843 E2F8A0AVK6 867 aa13.53□□□□□ -0.24
RAB11FIP1-202ENST00000330843 PRPF4O43172 522 aaKnown RBP eCLIP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms