RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 STAG2Q8N3U4 1231 aa16.93■□□□□ 0.3
CTHRC1-201ENST00000330295 ST13P5Q8NFI4 369 aaPredicted RBP16.93■□□□□ 0.3
CTHRC1-201ENST00000330295 HELQQ8TDG4 1101 aa16.93■□□□□ 0.3
CTHRC1-201ENST00000330295 ESR2Q92731 530 aa16.93■□□□□ 0.3
CTHRC1-201ENST00000330295 CLDN23Q96B33 292 aa16.93■□□□□ 0.3
CTHRC1-201ENST00000330295 IGSF21Q96ID5 467 aa16.93■□□□□ 0.3
CTHRC1-201ENST00000330295 AZI2Q9H6S1 392 aa16.93■□□□□ 0.3
CTHRC1-201ENST00000330295 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.93■□□□□ 0.3
CTHRC1-201ENST00000330295 TM4SF5O14894 197 aa16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 ZC3H11AO75152 810 aaKnown RBP eCLIP16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 CNPP09543 421 aaKnown RBP16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 LIMK1P53667 647 aa16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 TRAF1Q13077 416 aa16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 SLC44A4Q53GD3 710 aa16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 CCDC178Q5BJE1 867 aa16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 RSPO2Q6UXX9 243 aaPredicted RBP16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 TBC1D10CQ8IV04 446 aa16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 KIAA0319LQ8IZA0 1049 aa16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 MAP4K1Q92918 833 aa16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 GPRASP2Q96D09 838 aa16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 CDHR1Q96JP9 859 aa16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 OSMRQ99650 979 aa16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 RWDD1Q9H446 243 aaPredicted RBP16.92■□□□□ 0.3
CTHRC1-201ENST00000330295 EVPLQ92817 2033 aa16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 TMEM8BA6NDV4 472 aa16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 TAF4O00268 1085 aa16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 INPPL1O15357 1258 aa16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 CD72P21854 359 aa16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 KLRC1P26715 233 aa16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 RPS9P46781 194 aaKnown RBP16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 CRYBB1P53674 252 aaPredicted RBP16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 NRLP54845 237 aa16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 HDAC1Q13547 482 aaPredicted RBP16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 KIZQ2M2Z5 673 aa16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 GET4Q7L5D6 327 aaPredicted RBP16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 IQCA1Q86XH1 822 aa16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 HOMER1Q86YM7 354 aa16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 BCL7CQ8WUZ0 217 aaPredicted RBP16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 SMG7Q92540 1137 aaKnown RBP16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 PPP1R16BQ96T49 567 aa16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 RPP25Q9BUL9 199 aaKnown RBP16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 ZMYM6O95789 1325 aa16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 NEDD4P46934 1319 aa16.91■□□□□ 0.3
CTHRC1-201ENST00000330295 CARNS1A5YM72 827 aa16.9■□□□□ 0.3
CTHRC1-201ENST00000330295 KLRF2D3W0D1 207 aa16.9■□□□□ 0.3
CTHRC1-201ENST00000330295 TDGF1P13385 188 aa16.9■□□□□ 0.3
CTHRC1-201ENST00000330295 ZSCAN20P17040 1043 aaPredicted RBP16.9■□□□□ 0.3
CTHRC1-201ENST00000330295 VN1R3Q9BXE9 311 aa16.9■□□□□ 0.3
CTHRC1-201ENST00000330295 TMEM121BQ9BXQ6 578 aaPredicted RBP16.9■□□□□ 0.3
CTHRC1-201ENST00000330295 RNF41Q9H4P4 317 aaPredicted RBP16.9■□□□□ 0.3
CTHRC1-201ENST00000330295 PKD2L1Q9P0L9 805 aa16.9■□□□□ 0.3
CTHRC1-201ENST00000330295 NCAM2O15394 837 aa16.89■□□□□ 0.29
CTHRC1-201ENST00000330295 RFPL2O75678 378 aa16.89■□□□□ 0.29
CTHRC1-201ENST00000330295 TARSP26639 723 aaKnown RBP16.89■□□□□ 0.29
CTHRC1-201ENST00000330295 MTAPQ13126 283 aa16.89■□□□□ 0.29
CTHRC1-201ENST00000330295 ELMSAN1Q6PJG2 1045 aa16.89■□□□□ 0.29
CTHRC1-201ENST00000330295 PLPPR4Q7Z2D5 763 aa16.89■□□□□ 0.29
CTHRC1-201ENST00000330295 ZNF598Q86UK7 904 aaKnown RBP16.89■□□□□ 0.29
CTHRC1-201ENST00000330295 ENAHQ8N8S7 591 aaPredicted RBP16.89■□□□□ 0.29
CTHRC1-201ENST00000330295 FGF14Q92915 247 aa16.89■□□□□ 0.29
CTHRC1-201ENST00000330295 NELL2Q99435 816 aa16.89■□□□□ 0.29
CTHRC1-201ENST00000330295 BAZ2BQ9UIF8 2168 aaKnown RBP16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 LILRB3O75022 631 aa16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 KCNK5O95279 499 aa16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 SSBP05455 408 aaKnown RBP eCLIP16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 SIM2Q14190 667 aaPredicted RBP16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 AASDHQ4L235 1098 aaPredicted RBP16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 ANKRD45Q5TZF3 282 aa16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 PI4K2BQ8TCG2 481 aa16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 ZNF707Q96C28 371 aaPredicted RBP16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 PIGSQ96S52 555 aa16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 ZSCAN10Q96SZ4 725 aaPredicted RBP16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 JPH1Q9HDC5 661 aaPredicted RBP16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 FAM217BQ9NTX9 383 aaPredicted RBP16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 DPP7Q9UHL4 492 aa16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 DSPP15924 2871 aaKnown RBP16.88■□□□□ 0.29
CTHRC1-201ENST00000330295 A0A0U1RQF3 1178 aa16.87■□□□□ 0.29
CTHRC1-201ENST00000330295 GALTP07902 379 aa16.87■□□□□ 0.29
CTHRC1-201ENST00000330295 ITGB5P18084 799 aa16.87■□□□□ 0.29
CTHRC1-201ENST00000330295 STAT5BP51692 787 aa16.87■□□□□ 0.29
CTHRC1-201ENST00000330295 PFKPQ01813 784 aa16.87■□□□□ 0.29
CTHRC1-201ENST00000330295 PARM1Q6UWI2 310 aa16.87■□□□□ 0.29
CTHRC1-201ENST00000330295 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.87■□□□□ 0.29
CTHRC1-201ENST00000330295 PIDD1Q9HB75 910 aa16.87■□□□□ 0.29
CTHRC1-201ENST00000330295 ZFP37Q9Y6Q3 630 aaPredicted RBP16.87■□□□□ 0.29
CTHRC1-201ENST00000330295 TTC41PQ6P2S7 1318 aa16.87■□□□□ 0.29
CTHRC1-201ENST00000330295 SMG1Q96Q15 3661 aaKnown RBP16.87■□□□□ 0.29
CTHRC1-201ENST00000330295 GPR32O75388 356 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 PAPLNO95428 1278 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 MYBP10242 640 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 FZD5Q13467 585 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 MTMR1Q13613 665 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 SLC35G1Q2M3R5 365 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 EXOC6Q8TAG9 804 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 SMARCC2Q8TAQ2 1214 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 PHKBQ93100 1093 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 NRDE2Q9H7Z3 1164 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 MRPL17Q9NRX2 175 aaKnown RBP16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 SLC9A2Q9UBY0 812 aa16.86■□□□□ 0.29
CTHRC1-201ENST00000330295 STK39Q9UEW8 545 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms