RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.76□□□□□ -0.37
SHMT2-201ENST00000328923 MB21D1Q8N884 522 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 RASAL2Q9UJF2 1139 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 MROH7Q68CQ1 1323 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 POTEJP0CG39 1038 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 COL6A2P12110 1019 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 EEF1GP26641 437 aaKnown RBP12.76□□□□□ -0.37
SHMT2-201ENST00000328923 NEK2P51955 445 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 DMPKQ09013 629 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 UBE3CQ15386 1083 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 CCDC6Q16204 474 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 PARP6Q2NL67 630 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 TREML1Q86YW5 311 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 ANKRD13CQ8N6S4 541 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 SYMPKQ92797 1274 aaKnown RBP12.76□□□□□ -0.37
SHMT2-201ENST00000328923 DENND2DQ9H6A0 471 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-201ENST00000328923 CNNM2Q9H8M5 875 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 STOML1Q9UBI4 398 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 SALL4Q9UJQ4 1053 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 ITGB1BP2Q9UKP3 347 aa12.76□□□□□ -0.37
SHMT2-201ENST00000328923 PDS5AQ29RF7 1337 aaKnown RBP12.75□□□□□ -0.37
SHMT2-201ENST00000328923 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-201ENST00000328923 GTPBP6O43824 516 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-201ENST00000328923 PLEKP08567 350 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-201ENST00000328923 ZAP70P43403 619 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 CDK7P50613 346 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 SH3BGRP55822 239 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-201ENST00000328923 OCRLQ01968 901 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 ZNF658Q5TYW1 1059 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-201ENST00000328923 ZNF507Q8TCN5 953 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 DQX1Q8TE96 717 aaKnown RBP12.75□□□□□ -0.37
SHMT2-201ENST00000328923 ZNF512BQ96KM6 892 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-201ENST00000328923 DUSP9Q99956 384 aaKnown RBP12.75□□□□□ -0.37
SHMT2-201ENST00000328923 DHX36Q9H2U1 1008 aaKnown RBP12.75□□□□□ -0.37
SHMT2-201ENST00000328923 DENND2AQ9ULE3 1009 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 KCNJ14Q9UNX9 436 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 FRMD4BQ9Y2L6 1034 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 XDHP47989 1333 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 GJB6O95452 261 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 MYBP10242 640 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 GUCY1A2P33402 732 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 CAMK2BQ13554 666 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 KPNB1Q14974 876 aaKnown RBP12.75□□□□□ -0.37
SHMT2-201ENST00000328923 RTN1Q16799 776 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 ZNF394Q53GI3 561 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 RRAGBQ5VZM2 374 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 NKX2-3Q8TAU0 364 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 EPSTI1Q96J88 318 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 SETDB2Q96T68 719 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 IFIH1Q9BYX4 1025 aaKnown RBP12.75□□□□□ -0.37
SHMT2-201ENST00000328923 ZBTB1Q9Y2K1 713 aa12.75□□□□□ -0.37
SHMT2-201ENST00000328923 UBE2Q2LH0YL09 131 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 EPHB2P29323 1055 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 NEK3P51956 506 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 EMP3P54852 163 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 IGBP1P78318 339 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 MGAT5Q09328 741 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 NR5A1Q13285 461 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 MTMR3Q13615 1198 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 SPA17Q15506 151 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 WDR72Q3MJ13 1102 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 EAPPQ56P03 285 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-201ENST00000328923 KLHDC7AQ5VTJ3 777 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 TRIM67Q6ZTA4 783 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 MARK2Q7KZI7 788 aaKnown RBP12.74□□□□□ -0.37
SHMT2-201ENST00000328923 KBTBD2Q8IY47 623 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 CRACR2BQ8N4Y2 399 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-201ENST00000328923 TBC1D16Q8TBP0 767 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 HSPBAP1Q96EW2 488 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 TTYH3Q9C0H2 523 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 CCDC134Q9H6E4 229 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 ZNF148Q9UQR1 794 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 ARL2BPQ9Y2Y0 163 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 MYPNQ86TC9 1320 aa12.74□□□□□ -0.37
SHMT2-201ENST00000328923 TCP11X1B4DZS4 312 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 OR6B1O95007 311 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 PCCAP05165 728 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-201ENST00000328923 ADORA1P30542 326 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 SKIV2L2P42285 1042 aaKnown RBP12.73□□□□□ -0.37
SHMT2-201ENST00000328923 CCR3P51677 355 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 ARPC4P59998 168 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 IFI35P80217 286 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-201ENST00000328923 SCARF1Q14162 830 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 KHDC1Q4VXA5 237 aaKnown RBP12.73□□□□□ -0.37
SHMT2-201ENST00000328923 C6orf183Q5T699 404 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 LRRC8BQ6P9F7 803 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 GPIHBP1Q8IV16 184 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 MARCH10Q8NA82 808 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-201ENST00000328923 ZBTB38Q8NAP3 1195 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-201ENST00000328923 RBM46Q8TBY0 533 aaKnown RBP12.73□□□□□ -0.37
SHMT2-201ENST00000328923 FAM89AQ96GI7 184 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 MYL10Q9BUA6 226 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 LRMDAQ9H2I8 198 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 DCLRE1BQ9H816 532 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 CABP5Q9NP86 173 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 CLIC5Q9NZA1 410 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 VPS54Q9P1Q0 977 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 BTBD7Q9P203 1132 aa12.73□□□□□ -0.37
SHMT2-201ENST00000328923 LARSQ9P2J5 1176 aaKnown RBP12.73□□□□□ -0.37
SHMT2-201ENST00000328923 PCDHA13Q9Y5I0 950 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms