RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 LRRC41Q15345 812 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 PCBP2Q15366 365 aaKnown RBP eCLIP5.26□□□□□ -1.57
SKP1-201ENST00000328392 EPHA7Q15375 998 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 SURF1Q15526 300 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 TTC38Q5R3I4 469 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 SLFN12LQ6IEE8 588 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 TIGD7Q6NT04 549 aaPredicted RBP5.26□□□□□ -1.57
SKP1-201ENST00000328392 DPP8Q6V1X1 898 aaPredicted RBP5.26□□□□□ -1.57
SKP1-201ENST00000328392 RTN4RL1Q86UN2 441 aaPredicted RBP5.26□□□□□ -1.57
SKP1-201ENST00000328392 PNMA8AQ86V59 439 aaPredicted RBP5.26□□□□□ -1.57
SKP1-201ENST00000328392 ZZZ3Q8IYH5 903 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 CBARPQ8N350 705 aaPredicted RBP5.26□□□□□ -1.57
SKP1-201ENST00000328392 EAF2Q96CJ1 260 aaPredicted RBP5.26□□□□□ -1.57
SKP1-201ENST00000328392 HOOK2Q96ED9 719 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 SAMD11Q96NU1 681 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 GNRHR2Q96P88 292 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 METTL14Q9HCE5 456 aaKnown RBP5.26□□□□□ -1.57
SKP1-201ENST00000328392 MKS1Q9NXB0 559 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 ELL2O00472 640 aaPredicted RBP5.25□□□□□ -1.57
SKP1-201ENST00000328392 PRPF6O94906 941 aaKnown RBP5.25□□□□□ -1.57
SKP1-201ENST00000328392 PCDH8O95206 1070 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 PRLP01236 227 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 OSMP13725 252 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 INSRRP14616 1297 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 KCNQ1P51787 676 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 RRADP55042 308 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 SRSF2Q01130 221 aaKnown RBP5.25□□□□□ -1.57
SKP1-201ENST00000328392 USP10Q14694 798 aaKnown RBP5.25□□□□□ -1.57
SKP1-201ENST00000328392 MYBPC3Q14896 1274 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 STILQ15468 1287 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 TOR2AQ5JU69 321 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 ZBTB41Q5SVQ8 909 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 SLFN13Q68D06 897 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 ESPNLQ6ZVH7 1005 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 LARP4Q71RC2 724 aaKnown RBP eCLIP5.25□□□□□ -1.57
SKP1-201ENST00000328392 CXorf67Q86X51 503 aaPredicted RBP5.25□□□□□ -1.57
SKP1-201ENST00000328392 PHYKPLQ8IUZ5 450 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 FMNL3Q8IVF7 1028 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 WDR75Q8IWA0 830 aaKnown RBP5.25□□□□□ -1.57
SKP1-201ENST00000328392 REXO1L1PQ8IX06 675 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 AMOTL1Q8IY63 956 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 TSR2Q969E8 191 aaKnown RBP5.25□□□□□ -1.57
SKP1-201ENST00000328392 FUBP3Q96I24 572 aaKnown RBP eCLIP5.25□□□□□ -1.57
SKP1-201ENST00000328392 SLC2A13Q96QE2 648 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 BTBD2Q9BX70 525 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 DNAJC28Q9NX36 388 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 IP6K2Q9UHH9 426 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 TCEAL9Q9UHQ7 104 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 KCNG1Q9UIX4 513 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 USP18Q9UMW8 372 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 ASB1Q9Y576 335 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 PPP2R3BQ9Y5P8 575 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 SLC4A7Q9Y6M7 1214 aa5.25□□□□□ -1.57
SKP1-201ENST00000328392 ST20-MTHFSA0A0A6YYL1 179 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 PRSS38A1L453 326 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 ZNF20P17024 532 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 ROM1Q03395 351 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 ADCY2Q08462 1091 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 ADCY1Q08828 1119 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 TBR1Q16650 682 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 RNF151Q2KHN1 245 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 KANK2Q63ZY3 851 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 CIR1Q86X95 450 aaPredicted RBP5.24□□□□□ -1.57
SKP1-201ENST00000328392 NME9Q86XW9 330 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 PPM1NQ8N819 430 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 LMBR1Q8WVP7 490 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 FAXDC2Q96IV6 333 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 MAML3Q96JK9 1138 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 WWC2-AS2Q96NR7 200 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 LRRC37BQ96QE4 947 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 CARD11Q9BXL7 1154 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 KIAA1683Q9H0B3 1180 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 OR10A5Q9H207 317 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 PRDM12Q9H4Q4 367 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 CD248Q9HCU0 757 aa5.24□□□□□ -1.57
SKP1-201ENST00000328392 CCM2LQ9NUG4 571 aaPredicted RBP5.24□□□□□ -1.57
SKP1-201ENST00000328392 NOB1Q9ULX3 412 aaKnown RBP5.24□□□□□ -1.57
SKP1-201ENST00000328392 LUC7L2Q9Y383 392 aaKnown RBP5.24□□□□□ -1.57
SKP1-201ENST00000328392 SHTN1A0MZ66 631 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 CUTAO60888 179 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 SNUPNO95149 360 aaKnown RBP5.23□□□□□ -1.57
SKP1-201ENST00000328392 CT47B1P0C2W7 299 aaPredicted RBP5.23□□□□□ -1.57
SKP1-201ENST00000328392 ETV4P43268 484 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 GPR3P46089 330 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 ALDH6A1Q02252 535 aaKnown RBP5.23□□□□□ -1.57
SKP1-201ENST00000328392 MCL1Q07820 350 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 FAPQ12884 760 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 ODF1Q14990 250 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 UGT8Q16880 541 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 GPR158Q5T848 1215 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 CXXC5Q7LFL8 322 aaKnown RBP5.23□□□□□ -1.57
SKP1-201ENST00000328392 C1orf162Q8NEQ5 155 aaPredicted RBP5.23□□□□□ -1.57
SKP1-201ENST00000328392 CHST13Q8NET6 341 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 DNERQ8NFT8 737 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 E2F7Q96AV8 911 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 LMF1Q96S06 567 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 GPR20Q99678 358 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 MENTQ9BUN1 341 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 MTG2Q9H4K7 406 aa5.23□□□□□ -1.57
SKP1-201ENST00000328392 ZIM2Q9NZV7 527 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms