RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 PDE1BQ01064 536 aa10.57□□□□□ -0.72
SP1-201ENST00000327443 BCL2A1Q16548 175 aa10.57□□□□□ -0.72
SP1-201ENST00000327443 MUM1Q2TAK8 710 aa10.57□□□□□ -0.72
SP1-201ENST00000327443 MFSD14BQ5SR56 506 aa10.57□□□□□ -0.72
SP1-201ENST00000327443 MTMR14Q8NCE2 650 aa10.57□□□□□ -0.72
SP1-201ENST00000327443 BRF1Q92994 677 aa10.57□□□□□ -0.72
SP1-201ENST00000327443 DDX50Q9BQ39 737 aaKnown RBP10.57□□□□□ -0.72
SP1-201ENST00000327443 NRDE2Q9H7Z3 1164 aa10.57□□□□□ -0.72
SP1-201ENST00000327443 LY9Q9HBG7 655 aa10.57□□□□□ -0.72
SP1-201ENST00000327443 NCOA5Q9HCD5 579 aaKnown RBP10.57□□□□□ -0.72
SP1-201ENST00000327443 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.57□□□□□ -0.72
SP1-201ENST00000327443 SLC12A6Q9UHW9 1150 aa10.57□□□□□ -0.72
SP1-201ENST00000327443 TTLL3Q9Y4R7 772 aa10.57□□□□□ -0.72
SP1-201ENST00000327443 MGEA5O60502 916 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 DDAH1O94760 285 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 COL6A2P12110 1019 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 SERPINB3P29508 390 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 CKAP4Q07065 602 aaKnown RBP10.56□□□□□ -0.72
SP1-201ENST00000327443 DACT2Q5SW24 774 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 FAM47EQ6ZV65 393 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 TRPM8Q7Z2W7 1104 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 TREML1Q86YW5 311 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 DCLK2Q8N568 766 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 RNF10Q8N5U6 811 aaKnown RBP10.56□□□□□ -0.72
SP1-201ENST00000327443 KRI1Q8N9T8 703 aaKnown RBP10.56□□□□□ -0.72
SP1-201ENST00000327443 MRPS27Q92552 414 aaKnown RBP10.56□□□□□ -0.72
SP1-201ENST00000327443 QPCTLQ9NXS2 382 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 EURLQ9NYK6 297 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 DICER1Q9UPY3 1922 aaKnown RBP10.56□□□□□ -0.72
SP1-201ENST00000327443 TTLL13PA6NNM8 815 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 RARAP10276 462 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 ADD1P35611 737 aaKnown RBP10.56□□□□□ -0.72
SP1-201ENST00000327443 CCR3P51677 355 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 CSE1LP55060 971 aaKnown RBP10.56□□□□□ -0.72
SP1-201ENST00000327443 SEC23AQ15436 765 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 CCDC153Q494R4 210 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 CHADLQ6NUI6 762 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 KLC3Q6P597 504 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 SMC6Q96SB8 1091 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 HNRNPABQ99729 332 aaKnown RBP10.56□□□□□ -0.72
SP1-201ENST00000327443 USP20Q9Y2K6 914 aa10.56□□□□□ -0.72
SP1-201ENST00000327443 USP17L3A6NCW0 530 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 USP17L4A6NCW7 530 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 LCA5LO95447 670 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 CALB2P22676 271 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 IRF5Q13568 498 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 TTLL12Q14166 644 aaPredicted RBP10.55□□□□□ -0.72
SP1-201ENST00000327443 CMPK2Q5EBM0 449 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 USP17L1Q7RTZ2 530 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 CATIPQ7Z7H3 387 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 DDX23Q9BUQ8 820 aaKnown RBP10.55□□□□□ -0.72
SP1-201ENST00000327443 C2orf49Q9BVC5 232 aaPredicted RBP10.55□□□□□ -0.72
SP1-201ENST00000327443 LRRC27Q9C0I9 530 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 HOXC10Q9NYD6 342 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 STIM2Q9P246 746 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 HPS5Q9UPZ3 1129 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 DIS3Q9Y2L1 958 aaKnown RBP10.55□□□□□ -0.72
SP1-201ENST00000327443 A6NJR5 290 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 PRKAB2O43741 272 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 CCT6AP40227 531 aaKnown RBP10.55□□□□□ -0.72
SP1-201ENST00000327443 FKBP1CQ5VVH2 108 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 OTUD7BQ6GQQ9 843 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 CYB5R4Q7L1T6 521 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 OSTM1Q86WC4 334 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 MIGA1Q8NAN2 632 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 ATP8B4Q8TF62 1192 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 UPF1Q92900 1129 aaKnown RBP eCLIP10.55□□□□□ -0.72
SP1-201ENST00000327443 MPP4Q96JB8 637 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 XPO6Q96QU8 1125 aaKnown RBP10.55□□□□□ -0.72
SP1-201ENST00000327443 NAA15Q9BXJ9 866 aaKnown RBP10.55□□□□□ -0.72
SP1-201ENST00000327443 IDI2Q9BXS1 227 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 RNPEPL1Q9HAU8 725 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 PIM2Q9P1W9 311 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 FAM32AQ9Y421 112 aaKnown RBP10.55□□□□□ -0.72
SP1-201ENST00000327443 ATRNL1Q5VV63 1379 aa10.55□□□□□ -0.72
SP1-201ENST00000327443 SIPA1L1O43166 1804 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 H0Y3Z8 333 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 IFIT3O14879 490 aaKnown RBP10.54□□□□□ -0.72
SP1-201ENST00000327443 TEX28O15482 410 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 TJP3O95049 919 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 ASMTLO95671 621 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 FAM153BP0C7A2 387 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 BTDP43251 543 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 RXRGP48443 463 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 DYNLL1P63167 89 aaKnown RBP10.54□□□□□ -0.72
SP1-201ENST00000327443 MSLNQ13421 630 aaPredicted RBP10.54□□□□□ -0.72
SP1-201ENST00000327443 FAM153CQ494X1 144 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 EAPPQ56P03 285 aaPredicted RBP10.54□□□□□ -0.72
SP1-201ENST00000327443 TRIM67Q6ZTA4 783 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 C16orf86Q6ZW13 317 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 METTL16Q86W50 562 aaKnown RBP10.54□□□□□ -0.72
SP1-201ENST00000327443 DGKHQ86XP1 1220 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 WASF1Q92558 559 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 UIMC1Q96RL1 719 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 CNOT8Q9UFF9 292 aaKnown RBP10.54□□□□□ -0.72
SP1-201ENST00000327443 FAM153AQ9UHL3 310 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 DAGLAQ9Y4D2 1042 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 NOX1Q9Y5S8 564 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 MYH8P13535 1937 aa10.54□□□□□ -0.72
SP1-201ENST00000327443 ECE2O60344 883 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms