RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 SLC39A14Q15043 492 aa17.18■□□□□ 0.34
TSFM-201ENST00000323833 SPECC1Q5M775 1068 aa17.18■□□□□ 0.34
TSFM-201ENST00000323833 HYIQ5T013 277 aa17.18■□□□□ 0.34
TSFM-201ENST00000323833 FAM102BQ5T8I3 360 aa17.18■□□□□ 0.34
TSFM-201ENST00000323833 RNF149Q8NC42 400 aa17.18■□□□□ 0.34
TSFM-201ENST00000323833 ZNF396Q96N95 335 aaPredicted RBP17.18■□□□□ 0.34
TSFM-201ENST00000323833 CLIC6Q96NY7 704 aa17.18■□□□□ 0.34
TSFM-201ENST00000323833 ADAM2Q99965 735 aa17.18■□□□□ 0.34
TSFM-201ENST00000323833 CSRNP2Q9H175 543 aa17.18■□□□□ 0.34
TSFM-201ENST00000323833 TSPYL2Q9H2G4 693 aaPredicted RBP17.18■□□□□ 0.34
TSFM-201ENST00000323833 SEMA6BQ9H3T3 888 aa17.18■□□□□ 0.34
TSFM-201ENST00000323833 POLD4Q9HCU8 107 aa17.18■□□□□ 0.34
TSFM-201ENST00000323833 DAXXQ9UER7 740 aaPredicted RBP17.18■□□□□ 0.34
TSFM-201ENST00000323833 SRPRBQ9Y5M8 271 aaKnown RBP17.18■□□□□ 0.34
TSFM-201ENST00000323833 DENND3A2RUS2 1198 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 ARHGEF15O94989 841 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 CYP11B2P19099 503 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 GLRA2P23416 452 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 UBA7P41226 1012 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 NASPP49321 788 aaPredicted RBP17.17■□□□□ 0.34
TSFM-201ENST00000323833 CAPSQ13938 189 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 MXD4Q14582 209 aaPredicted RBP17.17■□□□□ 0.34
TSFM-201ENST00000323833 STK38Q15208 465 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 RALGAPA2Q2PPJ7 1873 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 USP49Q70CQ1 688 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 EPSTI1Q96J88 318 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 CDK5RAP3Q96JB5 506 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 RAD9AQ99638 391 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 ZNF576Q9H609 170 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 MINDY3Q9H8M7 445 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 SLC28A3Q9HAS3 691 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 ZDHHC9Q9Y397 364 aa17.17■□□□□ 0.34
TSFM-201ENST00000323833 COL4A6Q14031 1691 aa17.16■□□□□ 0.34
TSFM-201ENST00000323833 TMEM265A0A087WTH1 108 aa17.16■□□□□ 0.34
TSFM-201ENST00000323833 BRD1O95696 1058 aa17.16■□□□□ 0.34
TSFM-201ENST00000323833 DSC3Q14574 896 aa17.16■□□□□ 0.34
TSFM-201ENST00000323833 KARSQ15046 597 aaKnown RBP17.16■□□□□ 0.34
TSFM-201ENST00000323833 TMEM119Q4V9L6 283 aa17.16■□□□□ 0.34
TSFM-201ENST00000323833 PPP2R2DQ66LE6 453 aa17.16■□□□□ 0.34
TSFM-201ENST00000323833 LINC00301Q8NCQ3 95 aa17.16■□□□□ 0.34
TSFM-201ENST00000323833 MCPH1Q8NEM0 835 aa17.16■□□□□ 0.34
TSFM-201ENST00000323833 INO80BQ9C086 356 aaPredicted RBP17.16■□□□□ 0.34
TSFM-201ENST00000323833 NT5C3AQ9H0P0 336 aa17.16■□□□□ 0.34
TSFM-201ENST00000323833 RGS18Q9NS28 235 aa17.16■□□□□ 0.34
TSFM-201ENST00000323833 MTMR10Q9NXD2 777 aa17.16■□□□□ 0.34
TSFM-201ENST00000323833 CHD9Q3L8U1 2897 aa17.15■□□□□ 0.34
TSFM-201ENST00000323833 SSBP05455 408 aaKnown RBP eCLIP17.15■□□□□ 0.34
TSFM-201ENST00000323833 ZSCAN20P17040 1043 aaPredicted RBP17.15■□□□□ 0.34
TSFM-201ENST00000323833 SFPQP23246 707 aaKnown RBP eCLIP17.15■□□□□ 0.34
TSFM-201ENST00000323833 HTRA4P83105 476 aaPredicted RBP17.15■□□□□ 0.34
TSFM-201ENST00000323833 TFDP1Q14186 410 aa17.15■□□□□ 0.34
TSFM-201ENST00000323833 CATSPER4Q7RTX7 472 aa17.15■□□□□ 0.34
TSFM-201ENST00000323833 SPRED2Q7Z698 418 aa17.15■□□□□ 0.34
TSFM-201ENST00000323833 SRGAP1Q7Z6B7 1085 aa17.15■□□□□ 0.34
TSFM-201ENST00000323833 LRRC15Q8TF66 581 aa17.15■□□□□ 0.34
TSFM-201ENST00000323833 BSNDQ8WZ55 320 aa17.15■□□□□ 0.34
TSFM-201ENST00000323833 CALML4Q96GE6 196 aa17.15■□□□□ 0.34
TSFM-201ENST00000323833 RUSC1Q9BVN2 902 aa17.15■□□□□ 0.34
TSFM-201ENST00000323833 INSL6Q9Y581 213 aa17.15■□□□□ 0.34
TSFM-201ENST00000323833 MORC2Q9Y6X9 1032 aaPredicted RBP17.15■□□□□ 0.34
TSFM-201ENST00000323833 COL4A4P53420 1690 aaPredicted RBP17.15■□□□□ 0.34
TSFM-201ENST00000323833 C9IYK1 514 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 SPTLC2O15270 562 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 SLC26A4O43511 780 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 PLA2G4BP0C869 781 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 PLCG1P19174 1290 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 PHKA2P46019 1235 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 SARSP49591 514 aaKnown RBP17.14■□□□□ 0.33
TSFM-201ENST00000323833 PTENP60484 403 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 TAP1Q03518 808 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 DNM1Q05193 864 aaKnown RBP17.14■□□□□ 0.33
TSFM-201ENST00000323833 GRIN2CQ14957 1233 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 RINT1Q6NUQ1 792 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 SLC24A5Q71RS6 500 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 NPAS4Q8IUM7 802 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 CRIPAKQ8N1N5 446 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 KRI1Q8N9T8 703 aaKnown RBP17.14■□□□□ 0.33
TSFM-201ENST00000323833 RASSF8Q8NHQ8 419 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 SYMPKQ92797 1274 aaKnown RBP17.14■□□□□ 0.33
TSFM-201ENST00000323833 GUCD1Q96NT3 240 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 YME1L1Q96TA2 773 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 CCSER1Q9C0I3 900 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 CERS4Q9HA82 394 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 C1orf112Q9NSG2 853 aa17.14■□□□□ 0.33
TSFM-201ENST00000323833 LINC01553A4QN01 128 aa17.13■□□□□ 0.33
TSFM-201ENST00000323833 LRRIQ4A6NIV6 560 aa17.13■□□□□ 0.33
TSFM-201ENST00000323833 YEATS4O95619 227 aa17.13■□□□□ 0.33
TSFM-201ENST00000323833 C1orf186Q6ZWK4 172 aa17.13■□□□□ 0.33
TSFM-201ENST00000323833 IFNLR1Q8IU57 520 aaPredicted RBP17.13■□□□□ 0.33
TSFM-201ENST00000323833 KCTD17Q8N5Z5 321 aa17.13■□□□□ 0.33
TSFM-201ENST00000323833 SYT2Q8N9I0 419 aaPredicted RBP17.13■□□□□ 0.33
TSFM-201ENST00000323833 CHAMP1Q96JM3 812 aa17.13■□□□□ 0.33
TSFM-201ENST00000323833 BLOC1S4Q9NUP1 217 aa17.13■□□□□ 0.33
TSFM-201ENST00000323833 LRFN2Q9ULH4 789 aa17.13■□□□□ 0.33
TSFM-201ENST00000323833 PIN4Q9Y237 131 aaKnown RBP17.13■□□□□ 0.33
TSFM-201ENST00000323833 PCDHB7Q9Y5E2 793 aa17.13■□□□□ 0.33
TSFM-201ENST00000323833 INO80B-WBP1J3KQ70 363 aa17.12■□□□□ 0.33
TSFM-201ENST00000323833 HIP1RO75146 1068 aa17.12■□□□□ 0.33
TSFM-201ENST00000323833 PPP6R2O75170 966 aa17.12■□□□□ 0.33
TSFM-201ENST00000323833 DGKIO75912 1065 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms