RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 HSPBP1Q9NZL4 362 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 ARHGAP20Q9P2F6 1191 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 TBK1Q9UHD2 729 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 E7EVH7 732 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 SREBF1P36956 1147 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 DHX9Q08211 1270 aaKnown RBP11.87□□□□□ -0.51
TOP3A-201ENST00000321105 SMAD1Q15797 465 aaKnown RBP11.87□□□□□ -0.51
TOP3A-201ENST00000321105 SH3BP5LQ7L8J4 393 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 SH3RF1Q7Z6J0 888 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 CBWD2Q8IUF1 395 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 BCAS4Q8TDM0 211 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 LRRC45Q96CN5 670 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 ATP6V0A4Q9HBG4 840 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 AFDNP55196 1824 aaKnown RBP11.87□□□□□ -0.51
TOP3A-201ENST00000321105 SMARCA1P28370 1054 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 FMO5P49326 533 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 DDX42Q86XP3 938 aaKnown RBP eCLIP11.87□□□□□ -0.51
TOP3A-201ENST00000321105 SPATA33Q96N06 139 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 ADPGKQ9BRR6 497 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 TARS2Q9BW92 718 aaKnown RBP11.87□□□□□ -0.51
TOP3A-201ENST00000321105 ACP6Q9NPH0 428 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 CNOT8Q9UFF9 292 aaKnown RBP11.87□□□□□ -0.51
TOP3A-201ENST00000321105 PARP2Q9UGN5 583 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 COL1A1P02452 1464 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-201ENST00000321105 GALCP54803 685 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 TKFCQ3LXA3 575 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 FMNL3Q8IVF7 1028 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 IL31RAQ8NI17 732 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 ANKS1AQ92625 1134 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 RNF34Q969K3 372 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 IDI2Q9BXS1 227 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 DNAJC18Q9H819 358 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 DAAM1Q9Y4D1 1078 aa11.87□□□□□ -0.51
TOP3A-201ENST00000321105 JAK3P52333 1124 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 PRKCEQ02156 737 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 NT5DC1Q5TFE4 455 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 CCDC63Q8NA47 563 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 RNF25Q96BH1 459 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-201ENST00000321105 CCDC77Q9BR77 488 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 CALN1Q9BXU9 219 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 VPS37BQ9H9H4 285 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 TOPORSQ9NS56 1045 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-201ENST00000321105 STAT5BP51692 787 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 CNTN2Q02246 1040 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 ARMC9Q7Z3E5 817 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 AGBL3Q8NEM8 1001 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 LPAR1Q92633 364 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 PLAGL2Q9UPG8 496 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 ATP2A1O14983 1001 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 KLRC4O43908 158 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 EGFRP00533 1210 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 TXNP10599 105 aaKnown RBP11.86□□□□□ -0.51
TOP3A-201ENST00000321105 PPP2R5AQ15172 486 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 SNRNP35Q16560 246 aaKnown RBP11.86□□□□□ -0.51
TOP3A-201ENST00000321105 TRIM50Q86XT4 487 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 OTUD6BQ8N6M0 293 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 CPA5Q8WXQ8 436 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 GMCL1Q96IK5 515 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 MTMR9Q96QG7 549 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 MED15Q96RN5 788 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 EHD4Q9H223 541 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 AGPAT3Q9NRZ7 376 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 STIM2Q9P246 746 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 LRRD1A4D1F6 860 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 SLITRK3O94933 977 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 GAS8O95995 478 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 CALCAP01258 141 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 ORC2Q13416 577 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-201ENST00000321105 SLC18A3Q16572 532 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 MAPK6Q16659 721 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 ZNF568Q3ZCX4 644 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 SGO2Q562F6 1265 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 SYCP2LQ5T4T6 812 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 DENND2CQ68D51 928 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 CASC4Q6P4E1 433 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 TRIM65Q6PJ69 517 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 MCPH1Q8NEM0 835 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 SYTL5Q8TDW5 730 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-201ENST00000321105 PNKPQ96T60 521 aa11.86□□□□□ -0.51
TOP3A-201ENST00000321105 RBAKQ9NYW8 714 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-201ENST00000321105 TTC7AQ9ULT0 858 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-201ENST00000321105 ICAM1P05362 532 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 FGRP09769 529 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 KRT15P19012 456 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 GABPB1Q06547 395 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-201ENST00000321105 BFSP1Q12934 665 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 PPFIA1Q13136 1202 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 APOBEC3FQ8IUX4 373 aaKnown RBP11.85□□□□□ -0.51
TOP3A-201ENST00000321105 C4orf32Q8N8J7 132 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 TUFT1Q9NNX1 390 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 RBM12Q9NTZ6 932 aaKnown RBP11.85□□□□□ -0.51
TOP3A-201ENST00000321105 ADAM22Q9P0K1 906 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 ADAM21Q9UKJ8 722 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 FOXN3O00409 490 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-201ENST00000321105 GGCXP38435 758 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 CTAGE3PQ8IX95 158 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 PPP1R14CQ8TAE6 165 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 BTBD6Q96KE9 485 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 IQCGQ9H095 443 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms