RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CYP4F11Q9HBI6 524 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 C16orf96A6NNT2 1141 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 GPS1Q13098 491 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 RBBP7Q16576 425 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 CCDC17Q96LX7 622 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 MXD3Q9BW11 206 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 WNT8AQ9H1J5 351 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 OSBPL3Q9H4L5 887 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 YEATS2Q9ULM3 1422 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 ZSCAN9O15535 394 aaPredicted RBP17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 CDH2P19022 906 aaPredicted RBP17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 POTEAQ6S8J7 498 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 ABCF3Q9NUQ8 709 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 ASNSD1Q9NWL6 643 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 GPC5P78333 572 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 GUCY1A3Q02108 690 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 KIF2CQ99661 725 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 PLEKHG3A1L390 1219 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 KRT16P08779 473 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 LGR6Q9HBX8 967 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 PSAPP07602 524 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 PGM1P36871 562 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 A1BGP04217 495 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 MYBL1P10243 752 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 GYG1P46976 350 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 DHX34Q14147 1143 aaKnown RBP17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 BRIP1Q9BX63 1249 aa17.94■□□□□ 0.46
SMCHD1-201ENST00000320876 CFAP69A5D8W1 941 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 CUL4AQ13619 759 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 OR6B2Q6IFH4 312 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 TRAF7Q6Q0C0 670 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 KCTD1Q719H9 257 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 PRMT1Q99873 361 aaKnown RBP17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 GOLPH3LQ9H4A5 285 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 C10orf88Q9H8K7 445 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 GCNAQ96QF7 691 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 WWP1Q9H0M0 922 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 SLITRK6Q9H5Y7 841 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 GID8Q9NWU2 228 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 HPCAL4Q9UM19 191 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 NUP153P49790 1475 aaKnown RBP17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 SH2B2O14492 632 aaPredicted RBP17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 PRPF3O43395 683 aaKnown RBP17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 CUL3Q13618 768 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 PHF21AQ96BD5 680 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 MYO1DO94832 1006 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 HADHAP40939 763 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 HSPA2P54652 639 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 CYLC2Q14093 348 aaPredicted RBP17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 MXD4Q14582 209 aaPredicted RBP17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 PPP6R3Q5H9R7 873 aaPredicted RBP17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 LZTS1Q9Y250 596 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 QRICH2Q9H0J4 1663 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 KRT7P08729 469 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 IFT43Q96FT9 208 aa17.93■□□□□ 0.46
SMCHD1-201ENST00000320876 B4GALNT2Q8NHY0 566 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 ALKBH8Q96BT7 664 aaKnown RBP17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 ABHD8Q96I13 439 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 AURKCQ9UQB9 309 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 ANGPT2O15123 496 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 VCAM1P19320 739 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 KCNA3P22001 575 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 APLFQ8IW19 511 aaPredicted RBP17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 ULK4Q96C45 1275 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 ZFYVE19Q96K21 471 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 INPP5FQ9Y2H2 1132 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 TCP11X1B4DZS4 312 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 GFPT1Q06210 699 aaPredicted RBP17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 TRADDQ15628 312 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 MSTO1Q9BUK6 570 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 DDX56Q9NY93 547 aaKnown RBP17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 SERPINB1P30740 379 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 PRKG1Q13976 671 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 ZNF579Q8NAF0 562 aaKnown RBP17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 MMTAG2Q9BU76 263 aaKnown RBP17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 MLXIPLQ9NP71 852 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 ARL2BPQ9Y2Y0 163 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 BRAFP15056 766 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 ADAM22Q9P0K1 906 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 SUPT3HO75486 399 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 BEGAINQ9BUH8 593 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 ITM2BQ9Y287 266 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 ZNF263O14978 683 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 VPS11Q9H270 941 aa17.92■□□□□ 0.46
SMCHD1-201ENST00000320876 LDHAP00338 332 aaKnown RBP17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 NR5A1Q13285 461 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 SCARA5Q6ZMJ2 495 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 CDR2LQ86X02 465 aaPredicted RBP17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 SNX24Q9Y343 169 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 PTPRTO14522 1441 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 ZSCAN20P17040 1043 aaPredicted RBP17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 SH3GL2Q99962 352 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 LZTS3O60299 673 aaPredicted RBP17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 USP14P54578 494 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 NFRKBQ6P4R8 1299 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 ASXL2Q76L83 1435 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 PZPP20742 1482 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 MEIS1O00470 390 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 ROR1Q01973 937 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 HEY1Q9Y5J3 304 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms