RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 CAP2P40123 477 aa16.89■□□□□ 0.3
SHROOM1-201ENST00000319854 KLHDC7AQ5VTJ3 777 aa16.89■□□□□ 0.3
SHROOM1-201ENST00000319854 MOXD1Q6UVY6 613 aa16.89■□□□□ 0.3
SHROOM1-201ENST00000319854 FAM178BQ8IXR5 827 aa16.89■□□□□ 0.3
SHROOM1-201ENST00000319854 NOX5Q96PH1 765 aa16.89■□□□□ 0.3
SHROOM1-201ENST00000319854 HSD17B14Q9BPX1 270 aa16.89■□□□□ 0.3
SHROOM1-201ENST00000319854 SEPT11Q9NVA2 429 aaKnown RBP16.89■□□□□ 0.3
SHROOM1-201ENST00000319854 COL20A1Q9P218 1284 aa16.89■□□□□ 0.3
SHROOM1-201ENST00000319854 PITPNM2Q9BZ72 1349 aa16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 CALUO43852 315 aaPredicted RBP16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 GNA14O95837 355 aa16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 VIL1P09327 827 aaKnown RBP16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 UCHL3P15374 230 aa16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 HMGB2P26583 209 aaKnown RBP16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 PAFAH1B1P43034 410 aa16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 CDK17Q00537 523 aa16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 CHADLQ6NUI6 762 aa16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 PLAAQ9Y263 795 aa16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 GJA3Q9Y6H8 435 aa16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 CIITAP33076 1130 aa16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 SAMD7Q7Z3H4 446 aa16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 IFT20Q8IY31 132 aa16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 SLC24A3Q9HC58 644 aa16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 MRPL11Q9Y3B7 192 aaKnown RBP16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 QSER1Q2KHR3 1735 aa16.89■□□□□ 0.29
SHROOM1-201ENST00000319854 PSMD10O75832 226 aa16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 PON1P27169 355 aa16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 SNCBQ16143 134 aa16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 CCDC121Q6ZUS5 278 aa16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 PARVGQ9HBI0 331 aa16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 GFPT2O94808 682 aa16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 ITGB5P18084 799 aa16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 PRELPP51888 382 aa16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 BYSLQ13895 437 aaKnown RBP16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 PLCB4Q15147 1175 aa16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 POTEAQ6S8J7 498 aa16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 NSMFQ6X4W1 530 aa16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 MAATS1Q7Z4T9 603 aa16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 CD302Q8IX05 232 aa16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 TACO1Q9BSH4 297 aaKnown RBP16.88■□□□□ 0.29
SHROOM1-201ENST00000319854 ARHGEF35A5YM69 484 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 TGFB1I1O43294 461 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 FLOT1O75955 427 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 CDR1P51861 262 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 ASTE1Q2TB18 679 aaPredicted RBP16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 ZNF571Q7Z3V5 609 aaPredicted RBP16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 RTKN2Q8IZC4 609 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 ELMO3Q96BJ8 720 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 KRT12Q99456 494 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 GREB1LQ9C091 1923 aaPredicted RBP16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 NEBLO76041 1014 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 RPSAP08865 295 aaKnown RBP16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 PRKG1Q13976 671 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 ARHGAP44Q17R89 818 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 EDRF1Q3B7T1 1238 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 FAM186BQ8IYM0 893 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 RBM46Q8TBY0 533 aaKnown RBP16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 CAMKK2Q96RR4 588 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 GMLQ99445 158 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 GANQ9H2C0 597 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 TYW1Q9NV66 732 aaKnown RBP16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 ZNRF3Q9ULT6 936 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 LRRN2O75325 713 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 SATB1Q01826 763 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 ANKRD20A8PQ5CZ79 823 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 KCNH7Q9NS40 1196 aa16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 CTDP1Q9Y5B0 961 aaPredicted RBP16.87■□□□□ 0.29
SHROOM1-201ENST00000319854 PPP1R12BO60237 982 aaPredicted RBP16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 SKAP2O75563 359 aaPredicted RBP16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 C1orf186Q6ZWK4 172 aa16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 SLC35C1Q96A29 364 aa16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 POLR3CQ9BUI4 534 aaPredicted RBP16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 RANBP17Q9H2T7 1088 aaKnown RBP16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 COL4A5P29400 1685 aa16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 GOLGA6L7A0A1B0GV03 622 aa16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 PIK3CDO00329 1044 aa16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 PDXKO00764 312 aa16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 KCNA3P22001 575 aa16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 RPL13P26373 211 aaKnown RBP16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 PAK2Q13177 524 aa16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 SLC18A3Q16572 532 aa16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 ACCSLQ4AC99 568 aa16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 TMBIM4Q9HC24 238 aa16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 CNOT8Q9UFF9 292 aaKnown RBP16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 TRAF3IP3Q9Y228 551 aa16.86■□□□□ 0.29
SHROOM1-201ENST00000319854 GMNCA6NCL1 334 aa16.85■□□□□ 0.29
SHROOM1-201ENST00000319854 HIP1RO75146 1068 aa16.85■□□□□ 0.29
SHROOM1-201ENST00000319854 TLDC1Q6P9B6 456 aa16.85■□□□□ 0.29
SHROOM1-201ENST00000319854 EPM2AIP1Q7L775 607 aaPredicted RBP16.85■□□□□ 0.29
SHROOM1-201ENST00000319854 MIER3Q7Z3K6 550 aa16.85■□□□□ 0.29
SHROOM1-201ENST00000319854 MREGQ8N565 214 aa16.85■□□□□ 0.29
SHROOM1-201ENST00000319854 SGSM3Q96HU1 749 aa16.85■□□□□ 0.29
SHROOM1-201ENST00000319854 TEKT3Q9BXF9 490 aa16.85■□□□□ 0.29
SHROOM1-201ENST00000319854 MYOZ2Q9NPC6 264 aa16.85■□□□□ 0.29
SHROOM1-201ENST00000319854 GPRC5CQ9NQ84 441 aa16.85■□□□□ 0.29
SHROOM1-201ENST00000319854 GGA2Q9UJY4 613 aa16.85■□□□□ 0.29
SHROOM1-201ENST00000319854 EXOC3O60645 756 aa16.85■□□□□ 0.29
SHROOM1-201ENST00000319854 ASNSP08243 561 aa16.85■□□□□ 0.29
SHROOM1-201ENST00000319854 CYP3A4P08684 503 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms