RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ZSWIM1Q9BR11 485 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 FAM192AQ9GZU8 254 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 MAD2L2Q9UI95 211 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 DCCP43146 1447 aa5.15□□□□□ -1.59
PTPN13-201ENST00000316707 DDX3XO00571 662 aaKnown RBP eCLIP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 RIPK2O43353 540 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 OAS1P00973 400 aaKnown RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 PLA2G4BP0C869 781 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 BCRP11274 1271 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 SOX5P35711 763 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 KCNJ2P63252 427 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 SLF2Q8IX21 1173 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 NELFCDQ8IXH7 590 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 C12orf50Q8NA57 414 aaPredicted RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 ART4Q93070 314 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 FAM84BQ96KN1 310 aaPredicted RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 OSBPL1AQ9BXW6 950 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 PITPNM3Q9BZ71 974 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 SEMA4AQ9H3S1 761 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 P4HA2O15460 535 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 GZMAP12544 262 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 GYG1P46976 350 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 YARSP54577 528 aaKnown RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 ENDOVQ8N8Q3 282 aaKnown RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 SCFD1Q8WVM8 642 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 BICD1Q96G01 975 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 PRMT1Q99873 361 aaKnown RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 YIPF3Q9GZM5 350 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 WNT8AQ9H1J5 351 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 KIF9Q9HAQ2 790 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 KCNK9Q9NPC2 374 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 ABCF3Q9NUQ8 709 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 RTN3O95197 1032 aaPredicted RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 ATP4AP20648 1035 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 CTCFP49711 727 aaPredicted RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 CUL3Q13618 768 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 ATP8B4Q8TF62 1192 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 RNF25Q96BH1 459 aaPredicted RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 NUDCD1Q96RS6 583 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 KCTD10Q9H3F6 313 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 WHRNQ9P202 907 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 C10orf71Q711Q0 1435 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 ATP2A1O14983 1001 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 CYTH3O43739 400 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 SLC9A1P19634 815 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 EPHA7Q15375 998 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 NFIL3Q16649 462 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 GRIPAP1Q4V328 841 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 FYB2Q5VWT5 728 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 RGS9BPQ6ZS82 235 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 LRRC8CQ8TDW0 803 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 LRRC37BQ96QE4 947 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 CELF4Q9BZC1 486 aaKnown RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 ADAM7Q9H2U9 754 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 RIOX1Q9H6W3 641 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 SAR1AQ9NR31 198 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 CCDC87Q9NVE4 849 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 CYP39A1Q9NYL5 469 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 LGALS13Q9UHV8 139 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 DNM3Q9UQ16 869 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 ALG6Q9Y672 507 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 NMT2O60551 498 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 TTC4O95801 387 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 VEGFAP15692 232 aaPredicted RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 IFI35P80217 286 aaPredicted RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 SLC45A4Q5BKX6 768 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 C6orf163Q5TEZ5 329 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 SUSD4Q5VX71 490 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 TEKT4Q8WW24 435 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 RGL1Q9NZL6 768 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 UVRAGQ9P2Y5 699 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 TCP11X1B4DZS4 312 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 NR3C1P04150 777 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 RXRBP28702 533 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 PSMC2P35998 433 aaKnown RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 EVA1CP58658 441 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 GPATCH4Q5T3I0 446 aaKnown RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 CCDC137Q6PK04 289 aaKnown RBP5.14□□□□□ -1.59
PTPN13-201ENST00000316707 GLYCTKQ8IVS8 523 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 LRRC15Q8TF66 581 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 HPS3Q969F9 1004 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 STARD13Q9Y3M8 1113 aa5.14□□□□□ -1.59
PTPN13-201ENST00000316707 POTEMA6NI47 508 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 ENO4A6NNW6 628 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 DCDC2CA8MYV0 355 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 CCDC22O60826 627 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 FOSP01100 380 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 ALAS1P13196 640 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 PON1P27169 355 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 MARK3P27448 753 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 FLT3P36888 993 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 MECOMQ03112 1051 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 CYP1B1Q16678 543 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 ZDHHC24Q6UX98 284 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 EP400NLQ6ZTU2 488 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 EXOC3L1Q86VI1 746 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 ERICH1Q86X53 443 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 SLC13A5Q86YT5 568 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms