RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 SPATA32Q96LK8 384 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 AK8Q96MA6 479 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 OSMRQ99650 979 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 MTRQ99707 1265 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 RUSC1Q9BVN2 902 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 CELF4Q9BZC1 486 aaKnown RBP8.75□□□□□ -1.01
CDC42-201ENST00000315554 DHX33Q9H6R0 707 aaKnown RBP8.75□□□□□ -1.01
CDC42-201ENST00000315554 ATP6V0A4Q9HBG4 840 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 DBR1Q9UK59 544 aaKnown RBP8.75□□□□□ -1.01
CDC42-201ENST00000315554 CFAP45Q9UL16 551 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 DNM3Q9UQ16 869 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 KDM3AQ9Y4C1 1321 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 TANC1Q9C0D5 1861 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 A0A087X0B3 334 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 NPHP3-ACAD11A0A0J9YXS1 232 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 ZBBXA8MT70 800 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 PPP6R2O75170 966 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 GPR32O75388 356 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 EYA4O95677 639 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 IBSPP21815 317 aaPredicted RBP8.74□□□□□ -1.01
CDC42-201ENST00000315554 FGFR4P22455 802 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 CD52P31358 61 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 DNM2P50570 870 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 MCM6Q14566 821 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 LPIN1Q14693 890 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 FAM26DQ5JW98 314 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 TMEM240Q5SV17 173 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 AXDND1Q5T1B0 1012 aaPredicted RBP8.74□□□□□ -1.01
CDC42-201ENST00000315554 FAM102BQ5T8I3 360 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 IER5Q5VY09 327 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 SHC4Q6S5L8 630 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 PLPP6Q8IY26 295 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 DBF4BQ8NFT6 615 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 KCNG4Q8TDN1 519 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 ASAP3Q8TDY4 903 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 PRPF31Q8WWY3 499 aaKnown RBP8.74□□□□□ -1.01
CDC42-201ENST00000315554 NLRP7Q8WX94 980 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 NLRP4Q96MN2 994 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 IPO9Q96P70 1041 aaKnown RBP8.74□□□□□ -1.01
CDC42-201ENST00000315554 POLR3FQ9H1D9 316 aaPredicted RBP8.74□□□□□ -1.01
CDC42-201ENST00000315554 ADAMTS10Q9H324 1103 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 AGO3Q9H9G7 860 aaKnown RBP8.74□□□□□ -1.01
CDC42-201ENST00000315554 BLOC1S4Q9NUP1 217 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 CXXC1Q9P0U4 656 aaPredicted RBP8.74□□□□□ -1.01
CDC42-201ENST00000315554 RCOR1Q9UKL0 485 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 NOC2LQ9Y3T9 749 aaKnown RBP8.74□□□□□ -1.01
CDC42-201ENST00000315554 ATP6V1DQ9Y5K8 247 aa8.74□□□□□ -1.01
CDC42-201ENST00000315554 ARID2Q68CP9 1835 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 A0A087WZ62 844 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 CUTAO60888 179 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 CAND2O75155 1236 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 DGAT1O75907 488 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 FGBP02675 491 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 PLA2G4BP0C869 781 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 SRGAP2CP0DJJ0 459 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 XRCC6P12956 609 aaKnown RBP eCLIP8.73□□□□□ -1.013e-11■□□□□ 9.2
CDC42-201ENST00000315554 MUTP22033 750 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 RFC2P35250 354 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 GPC3P51654 580 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 LAMTOR4Q0VGL1 99 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 NFX1Q12986 1120 aaKnown RBP8.73□□□□□ -1.01
CDC42-201ENST00000315554 FBXO47Q5MNV8 452 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 HYIQ5T013 277 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 ATL3Q6DD88 541 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 TMCO2Q7Z6W1 182 aaPredicted RBP8.73□□□□□ -1.01
CDC42-201ENST00000315554 RPAINQ86UA6 219 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 RPUSD2Q8IZ73 545 aaKnown RBP8.73□□□□□ -1.01
CDC42-201ENST00000315554 NME8Q8N427 588 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 PSPC1Q8WXF1 523 aaKnown RBP8.73□□□□□ -1.01
CDC42-201ENST00000315554 BSNDQ8WZ55 320 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 RAD54LQ92698 747 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 RNPC3Q96LT9 517 aaKnown RBP8.73□□□□□ -1.01
CDC42-201ENST00000315554 JPH2Q9BR39 696 aaPredicted RBP8.73□□□□□ -1.01
CDC42-201ENST00000315554 FDXACB1Q9BRP7 624 aaPredicted RBP8.73□□□□□ -1.01
CDC42-201ENST00000315554 CCSER1Q9C0I3 900 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 NT5C3AQ9H0P0 336 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 PRO3102Q9H379 93 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 CHMP5Q9NZZ3 219 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 COL4A3BPQ9Y5P4 624 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 EVPLQ92817 2033 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 SIP14410 1827 aa8.73□□□□□ -1.01
CDC42-201ENST00000315554 SFI1A8K8P3 1242 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 CXCL10P02778 98 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 LIG1P18858 919 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 CYP11B2P19099 503 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 GLRA2P23416 452 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 TXLNAP40222 546 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 CRYBB1P53674 252 aaPredicted RBP8.72□□□□□ -1.01
CDC42-201ENST00000315554 CAPSQ13938 189 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 TMCO4Q5TGY1 634 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 RRAGBQ5VZM2 374 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 FAM109BQ6ICB4 259 aaPredicted RBP8.72□□□□□ -1.01
CDC42-201ENST00000315554 RINT1Q6NUQ1 792 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 PSRC1Q6PGN9 363 aaPredicted RBP8.72□□□□□ -1.01
CDC42-201ENST00000315554 TSHZ1Q6ZSZ6 1077 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 GPBP1Q86WP2 473 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 RNF149Q8NC42 400 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 TCP11Q8WWU5 503 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 SEPT8Q92599 483 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 STAMQ92783 540 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms