RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 PKD2L1Q9P0L9 805 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.5□□□□□ -1.37
SEC22A-201ENST00000309934 FRMPD4Q14CM0 1322 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 ZNF541Q9H0D2 1346 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 ZNF233A6NK53 670 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 DDNO94850 711 aaPredicted RBP6.5□□□□□ -1.37
SEC22A-201ENST00000309934 SLU7O95391 586 aaKnown RBP6.5□□□□□ -1.37
SEC22A-201ENST00000309934 SLC8A3P57103 927 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 WHAMMP3Q1A5X7 153 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 PLEKHH3Q7Z736 793 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 CD302Q8IX05 232 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 C4orf32Q8N8J7 132 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 NAPGQ99747 312 aaPredicted RBP6.5□□□□□ -1.37
SEC22A-201ENST00000309934 NRBP1Q9UHY1 535 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 AFG3L2Q9Y4W6 797 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 A0A0G2JLL6 359 aaPredicted RBP6.5□□□□□ -1.37
SEC22A-201ENST00000309934 SLC15A5A6NIM6 579 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 MFAP3LO75121 409 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 ECM2O94769 699 aaPredicted RBP6.5□□□□□ -1.37
SEC22A-201ENST00000309934 ECEL1O95672 775 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 SUPT20HL2P0C7V6 817 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 TBXAS1P24557 533 aaPredicted RBP6.5□□□□□ -1.37
SEC22A-201ENST00000309934 STAT5BP51692 787 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 APLP1P51693 650 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 MDM2Q00987 491 aaPredicted RBP6.5□□□□□ -1.37
SEC22A-201ENST00000309934 ZFYVE27Q5T4F4 411 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 METTL7BQ6UX53 244 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 PRRT2Q7Z6L0 340 aaPredicted RBP6.5□□□□□ -1.37
SEC22A-201ENST00000309934 VSIG10LQ86VR7 867 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 SFR1Q86XK3 245 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 MORC4Q8TE76 937 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 JAKMIP2Q96AA8 810 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 AGBL1Q96MI9 1066 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 ERGIC2Q96RQ1 377 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 LSM14BQ9BX40 385 aaKnown RBP6.5□□□□□ -1.37
SEC22A-201ENST00000309934 MRPL4Q9BYD3 311 aaKnown RBP6.5□□□□□ -1.37
SEC22A-201ENST00000309934 DNAI1Q9UI46 699 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 GOLGA6L7A0A1B0GV03 622 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CTAGE15A4D2H0 777 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 PPP1R3GB7ZBB8 358 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 PFDN1O60925 122 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 ZC3H11AO75152 810 aaKnown RBP eCLIP6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CTAGE8P0CG41 777 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 RAPGEF1Q13905 1077 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 VGLL4Q14135 290 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CTTNQ14247 550 aaKnown RBP6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CENPPQ6IPU0 288 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CHADLQ6NUI6 762 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 ZNF467Q7Z7K2 595 aaPredicted RBP6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CTAGE6Q86UF2 777 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CTAGE4Q8IX94 777 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 NELFCDQ8IXH7 590 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 OPTNQ96CV9 577 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 ERO1AQ96HE7 468 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 ANKRD36BP1Q96IX9 119 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 TAF1DQ9H5J8 278 aaPredicted RBP6.49□□□□□ -1.37
SEC22A-201ENST00000309934 DNAJC18Q9H819 358 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 IFT122Q9HBG6 1241 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 ERAP1Q9NZ08 941 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 GABBR1Q9UBS5 961 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.49□□□□□ -1.37
SEC22A-201ENST00000309934 RASAL2Q9UJF2 1139 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 KCNH4Q9UQ05 1017 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 COL1A2P08123 1366 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 FAM205CA6NFA0 338 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 E9PMD0 336 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 K7ERI5 159 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 HNRNPDLO14979 420 aaKnown RBP6.49□□□□□ -1.37
SEC22A-201ENST00000309934 SLC37A4O43826 429 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 PSMD10O75832 226 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 URI1O94763 535 aaPredicted RBP6.49□□□□□ -1.37
SEC22A-201ENST00000309934 GARTP22102 1010 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CPT1AP50416 773 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 RNF187Q5TA31 235 aaPredicted RBP6.49□□□□□ -1.37
SEC22A-201ENST00000309934 TRIM72Q6ZMU5 477 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 OTOP1Q7RTM1 612 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CATSPER3Q86XQ3 398 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 POMGNT1Q8WZA1 660 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 STAMQ92783 540 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CAPN11Q9UMQ6 739 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 TRAF3IP3Q9Y228 551 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 RPTORQ8N122 1335 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CARNS1A5YM72 827 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 MYMKA6NI61 221 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 IL18RAPO95256 599 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 OATP04181 439 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 VIMP08670 466 aaKnown RBP6.49□□□□□ -1.37
SEC22A-201ENST00000309934 GBP1P32455 592 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 MAGEA1P43355 309 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 NAMPTP43490 491 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 FCGRTP55899 365 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 BIRC3Q13489 604 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 NR1I3Q14994 352 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 MAPK6Q16659 721 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 BMT2Q1RMZ1 405 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CCDC122Q5T0U0 273 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 ACBD5Q5T8D3 534 aaPredicted RBP6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CDKAL1Q5VV42 579 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 LCA5Q86VQ0 697 aa6.49□□□□□ -1.37
SEC22A-201ENST00000309934 CLEC10AQ8IUN9 316 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms