RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 ADCY2Q08462 1091 aa10.62□□□□□ -0.71
TMOD3-201ENST00000308580 ZNF699Q32M78 642 aa10.62□□□□□ -0.71
TMOD3-201ENST00000308580 FAM133BQ5BKY9 247 aaKnown RBP10.62□□□□□ -0.71
TMOD3-201ENST00000308580 C16orf86Q6ZW13 317 aa10.62□□□□□ -0.71
TMOD3-201ENST00000308580 AGPAT5Q9NUQ2 364 aa10.62□□□□□ -0.71
TMOD3-201ENST00000308580 CLTCQ00610 1675 aaKnown RBP10.62□□□□□ -0.71
TMOD3-201ENST00000308580 TADA3O75528 432 aa10.62□□□□□ -0.71
TMOD3-201ENST00000308580 KLRK1P26718 216 aa10.62□□□□□ -0.71
TMOD3-201ENST00000308580 STRIP1Q5VSL9 837 aa10.62□□□□□ -0.71
TMOD3-201ENST00000308580 C7orf25Q9BPX7 421 aa10.62□□□□□ -0.71
TMOD3-201ENST00000308580 MAP2K2P36507 400 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 HNRNPH2P55795 449 aaKnown RBP10.61□□□□□ -0.71
TMOD3-201ENST00000308580 NR1I3Q14994 352 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 MAP3K21Q5TCX8 1036 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 NUP85Q9BW27 656 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 SAYSD1Q9NPB0 183 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 CEP170BQ9Y4F5 1589 aaPredicted RBP10.61□□□□□ -0.71
TMOD3-201ENST00000308580 A0A087WUV0 522 aaPredicted RBP10.61□□□□□ -0.71
TMOD3-201ENST00000308580 VPS72Q15906 364 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 CYFIP1Q7L576 1253 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 FRMD5Q7Z6J6 570 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 TC2NQ8N9U0 490 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 NBPF3Q9H094 633 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 POLR3FQ9H1D9 316 aaPredicted RBP10.61□□□□□ -0.71
TMOD3-201ENST00000308580 NYAP2Q9P242 653 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 PCDHA10Q9Y5I2 948 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 TJP3O95049 919 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 SRGNP10124 158 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 SNCBQ16143 134 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 NUGGCQ68CJ6 796 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 ARMCX2Q7L311 632 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 EFCAB13Q8IY85 973 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 KCNB2Q92953 911 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 MTRQ99707 1265 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 ADGRB1O14514 1584 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 SLC8A1P32418 973 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 RAD9BQ6WBX8 426 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 C4orf50Q6ZRC1 276 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 PCGF5Q86SE9 256 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 ACAD9Q9H845 621 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 DIP2AQ14689 1571 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 HMGCS2P54868 508 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 SPATA4Q8NEY3 305 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 RBM41Q96IZ5 413 aaKnown RBP10.61□□□□□ -0.71
TMOD3-201ENST00000308580 NRXN1Q9ULB1 1477 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 RNASELQ05823 741 aaKnown RBP10.61□□□□□ -0.71
TMOD3-201ENST00000308580 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.61□□□□□ -0.716e-6■■□□□ 11.7
TMOD3-201ENST00000308580 PNMA3Q9UL41 463 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 CFAP36Q96G28 342 aa10.61□□□□□ -0.71
TMOD3-201ENST00000308580 PDS5AQ29RF7 1337 aaKnown RBP10.6□□□□□ -0.71
TMOD3-201ENST00000308580 SRGAP2BP0DMP2 458 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 SOX5P35711 763 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 KCNJ6P48051 423 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 VSNL1P62760 191 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 RFFLQ8WZ73 363 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 LPXNO60711 386 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 ARPP19P56211 112 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 LMBRD2Q68DH5 695 aaPredicted RBP10.6□□□□□ -0.71
TMOD3-201ENST00000308580 TRIM42Q8IWZ5 723 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 FBXL13Q8NEE6 735 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 REEP2Q9BRK0 252 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 TTC7AQ9ULT0 858 aaPredicted RBP10.6□□□□□ -0.71
TMOD3-201ENST00000308580 SH2D4BQ5SQS7 431 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 RHPN2Q8IUC4 686 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 RPAP3Q9H6T3 665 aaPredicted RBP10.6□□□□□ -0.71
TMOD3-201ENST00000308580 SALL3Q9BXA9 1300 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 VGLL3A8MV65 326 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 CASQ2O14958 399 aaPredicted RBP10.6□□□□□ -0.71
TMOD3-201ENST00000308580 PLS3P13797 630 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 GIMAP8Q8ND71 665 aaPredicted RBP10.6□□□□□ -0.71
TMOD3-201ENST00000308580 HDAC11Q96DB2 347 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 ZBTB12Q9Y330 459 aaPredicted RBP10.6□□□□□ -0.71
TMOD3-201ENST00000308580 JMJD4Q9H9V9 463 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 PHKA2P46019 1235 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 IRX4P78413 519 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 E2F5Q15329 346 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 HIBCHQ6NVY1 386 aaPredicted RBP10.6□□□□□ -0.71
TMOD3-201ENST00000308580 HHIPL2Q6UWX4 724 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 TUFT1Q9NNX1 390 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 PCSK1NQ9UHG2 260 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 IPO11Q9UI26 975 aaKnown RBP10.6□□□□□ -0.71
TMOD3-201ENST00000308580 PRR12Q9ULL5 1215 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 NOC2LQ9Y3T9 749 aaKnown RBP10.6□□□□□ -0.71
TMOD3-201ENST00000308580 LRRIQ1Q96JM4 1722 aa10.6□□□□□ -0.71
TMOD3-201ENST00000308580 DSTYKQ6XUX3 929 aa10.59□□□□□ -0.71
TMOD3-201ENST00000308580 BBS5Q8N3I7 341 aa10.59□□□□□ -0.71
TMOD3-201ENST00000308580 ELAC2Q9BQ52 826 aaKnown RBP10.59□□□□□ -0.71
TMOD3-201ENST00000308580 PFDN6O15212 129 aa10.59□□□□□ -0.71
TMOD3-201ENST00000308580 TOM1L1O75674 476 aa10.59□□□□□ -0.71
TMOD3-201ENST00000308580 CALB1P05937 261 aa10.59□□□□□ -0.71
TMOD3-201ENST00000308580 OTUD5Q96G74 571 aa10.59□□□□□ -0.71
TMOD3-201ENST00000308580 EVI5O60447 810 aa10.59□□□□□ -0.71
TMOD3-201ENST00000308580 GNA15P30679 374 aa10.59□□□□□ -0.71
TMOD3-201ENST00000308580 EN1Q05925 392 aaPredicted RBP10.59□□□□□ -0.71
TMOD3-201ENST00000308580 RBBP5Q15291 538 aaKnown RBP10.59□□□□□ -0.71
TMOD3-201ENST00000308580 RBAKQ9NYW8 714 aaPredicted RBP10.59□□□□□ -0.71
TMOD3-201ENST00000308580 TLK1Q9UKI8 766 aa10.59□□□□□ -0.71
TMOD3-201ENST00000308580 SNX12Q9UMY4 172 aa10.59□□□□□ -0.71
TMOD3-201ENST00000308580 TECPR2O15040 1411 aa10.59□□□□□ -0.71
TMOD3-201ENST00000308580 GPR75-ASB3A0A0A6YYF3 556 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms