RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 IL17AQ16552 155 aa23.18■■□□□ 1.3
MRPL39-201ENST00000307301 HAUS3Q68CZ6 603 aa23.18■■□□□ 1.3
MRPL39-201ENST00000307301 FERMT3Q86UX7 667 aa23.18■■□□□ 1.3
MRPL39-201ENST00000307301 CMTR2Q8IYT2 770 aaKnown RBP23.18■■□□□ 1.3
MRPL39-201ENST00000307301 NACC1Q96RE7 527 aa23.18■■□□□ 1.3
MRPL39-201ENST00000307301 FOXD4L1Q9NU39 408 aa23.18■■□□□ 1.3
MRPL39-201ENST00000307301 PRRC2BQ5JSZ5 2229 aaKnown RBP23.18■■□□□ 1.3
MRPL39-201ENST00000307301 REV3LO60673 3130 aa23.17■■□□□ 1.3
MRPL39-201ENST00000307301 VPS37CA5D8V6 355 aaPredicted RBP23.17■■□□□ 1.3
MRPL39-201ENST00000307301 USO1O60763 962 aaKnown RBP23.17■■□□□ 1.3
MRPL39-201ENST00000307301 ATP2C1P98194 919 aaPredicted RBP23.17■■□□□ 1.3
MRPL39-201ENST00000307301 ECM1Q16610 540 aa23.17■■□□□ 1.3
MRPL39-201ENST00000307301 INTS4Q96HW7 963 aaKnown RBP23.17■■□□□ 1.3
MRPL39-201ENST00000307301 RAB34Q9BZG1 259 aa23.17■■□□□ 1.3
MRPL39-201ENST00000307301 RNF216Q9NWF9 866 aaPredicted RBP23.17■■□□□ 1.3
MRPL39-201ENST00000307301 TMEM161AQ9NX61 479 aa23.17■■□□□ 1.3
MRPL39-201ENST00000307301 DBR1Q9UK59 544 aaKnown RBP23.17■■□□□ 1.3
MRPL39-201ENST00000307301 MRPL42Q9Y6G3 142 aaKnown RBP23.17■■□□□ 1.3
MRPL39-201ENST00000307301 ATG2AQ2TAZ0 1938 aa23.16■■□□□ 1.3
MRPL39-201ENST00000307301 PP2D1A8MPX8 630 aa23.16■■□□□ 1.3
MRPL39-201ENST00000307301 ASAP2O43150 1006 aa23.16■■□□□ 1.3
MRPL39-201ENST00000307301 PDCP20941 246 aa23.16■■□□□ 1.3
MRPL39-201ENST00000307301 CTNNB1P35222 781 aa23.16■■□□□ 1.3
MRPL39-201ENST00000307301 FAM102BQ5T8I3 360 aa23.16■■□□□ 1.3
MRPL39-201ENST00000307301 DTHD1Q6ZMT9 781 aa23.16■■□□□ 1.3
MRPL39-201ENST00000307301 CATSPER4Q7RTX7 472 aa23.16■■□□□ 1.3
MRPL39-201ENST00000307301 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.16■■□□□ 1.3
MRPL39-201ENST00000307301 RNF149Q8NC42 400 aa23.16■■□□□ 1.3
MRPL39-201ENST00000307301 CLP1Q92989 425 aaKnown RBP23.16■■□□□ 1.3
MRPL39-201ENST00000307301 ELAC1Q9H777 363 aaKnown RBP23.16■■□□□ 1.3
MRPL39-201ENST00000307301 MINDY3Q9H8M7 445 aa23.16■■□□□ 1.3
MRPL39-201ENST00000307301 PRDM6Q9NQX0 595 aa23.16■■□□□ 1.3
MRPL39-201ENST00000307301 PRUNE2Q8WUY3 3088 aa23.15■■□□□ 1.3
MRPL39-201ENST00000307301 FGFR1P11362 822 aa23.15■■□□□ 1.3
MRPL39-201ENST00000307301 MUTP22033 750 aa23.15■■□□□ 1.3
MRPL39-201ENST00000307301 BMPR1AP36894 532 aa23.15■■□□□ 1.3
MRPL39-201ENST00000307301 GPM6BQ13491 265 aa23.15■■□□□ 1.3
MRPL39-201ENST00000307301 MXD4Q14582 209 aaPredicted RBP23.15■■□□□ 1.3
MRPL39-201ENST00000307301 BRAPQ7Z569 592 aa23.15■■□□□ 1.3
MRPL39-201ENST00000307301 SRGAP1Q7Z6B7 1085 aa23.15■■□□□ 1.3
MRPL39-201ENST00000307301 ECHDC2Q86YB7 292 aa23.15■■□□□ 1.3
MRPL39-201ENST00000307301 ASAP3Q8TDY4 903 aa23.15■■□□□ 1.3
MRPL39-201ENST00000307301 SNX29Q8TEQ0 813 aa23.15■■□□□ 1.3
MRPL39-201ENST00000307301 CHST12Q9NRB3 414 aa23.15■■□□□ 1.3
MRPL39-201ENST00000307301 PIN4Q9Y237 131 aaKnown RBP23.15■■□□□ 1.3
MRPL39-201ENST00000307301 RWDD3Q9Y3V2 267 aa23.15■■□□□ 1.3
MRPL39-201ENST00000307301 TBKBP1A7MCY6 615 aa23.14■■□□□ 1.29
MRPL39-201ENST00000307301 H3BNC9 293 aa23.14■■□□□ 1.29
MRPL39-201ENST00000307301 ARL2P36404 184 aa23.14■■□□□ 1.29
MRPL39-201ENST00000307301 MAEAQ7L5Y9 396 aa23.14■■□□□ 1.29
MRPL39-201ENST00000307301 SNX21Q969T3 373 aa23.14■■□□□ 1.29
MRPL39-201ENST00000307301 POLR3FQ9H1D9 316 aaPredicted RBP23.14■■□□□ 1.29
MRPL39-201ENST00000307301 GPRC5CQ9NQ84 441 aa23.14■■□□□ 1.29
MRPL39-201ENST00000307301 DACT1Q9NYF0 836 aa23.14■■□□□ 1.29
MRPL39-201ENST00000307301 LMCD1Q9NZU5 365 aa23.14■■□□□ 1.29
MRPL39-201ENST00000307301 KIAA1024Q9UPX6 916 aa23.14■■□□□ 1.29
MRPL39-201ENST00000307301 STK24Q9Y6E0 443 aa23.14■■□□□ 1.29
MRPL39-201ENST00000307301 A0A0U1RQF3 1178 aa23.13■■□□□ 1.29
MRPL39-201ENST00000307301 ARHGEF35A5YM69 484 aa23.13■■□□□ 1.29
MRPL39-201ENST00000307301 C5orf67F2Z3F1 127 aa23.13■■□□□ 1.29
MRPL39-201ENST00000307301 SYT1P21579 422 aa23.13■■□□□ 1.29
MRPL39-201ENST00000307301 CDC25AP30304 524 aa23.13■■□□□ 1.29
MRPL39-201ENST00000307301 PHKA2P46019 1235 aa23.13■■□□□ 1.29
MRPL39-201ENST00000307301 CAPSQ13938 189 aa23.13■■□□□ 1.29
MRPL39-201ENST00000307301 RNF169Q8NCN4 708 aa23.13■■□□□ 1.29
MRPL39-201ENST00000307301 DDX19AQ9NUU7 478 aaKnown RBP23.13■■□□□ 1.29
MRPL39-201ENST00000307301 RNF19AQ9NV58 838 aa23.13■■□□□ 1.29
MRPL39-201ENST00000307301 RB1P06400 928 aa23.12■■□□□ 1.29
MRPL39-201ENST00000307301 GLRA2P23416 452 aa23.12■■□□□ 1.29
MRPL39-201ENST00000307301 PTENP60484 403 aa23.12■■□□□ 1.29
MRPL39-201ENST00000307301 TFDP1Q14186 410 aa23.12■■□□□ 1.29
MRPL39-201ENST00000307301 KRT79Q5XKE5 535 aa23.12■■□□□ 1.29
MRPL39-201ENST00000307301 TWF2Q6IBS0 349 aaKnown RBP23.12■■□□□ 1.29
MRPL39-201ENST00000307301 PADI6Q6TGC4 694 aa23.12■■□□□ 1.29
MRPL39-201ENST00000307301 MCPH1Q8NEM0 835 aa23.12■■□□□ 1.29
MRPL39-201ENST00000307301 MMTAG2Q9BU76 263 aaKnown RBP23.12■■□□□ 1.29
MRPL39-201ENST00000307301 PLXNA4Q9HCM2 1894 aa23.12■■□□□ 1.29
MRPL39-201ENST00000307301 AGPAT5Q9NUQ2 364 aa23.12■■□□□ 1.29
MRPL39-201ENST00000307301 VWA3AA6NCI4 1184 aa23.11■■□□□ 1.29
MRPL39-201ENST00000307301 ATF7P17544 494 aaPredicted RBP23.11■■□□□ 1.29
MRPL39-201ENST00000307301 ZNF598Q86UK7 904 aaKnown RBP23.11■■□□□ 1.29
MRPL39-201ENST00000307301 C11orf84Q9BUA3 381 aaPredicted RBP23.11■■□□□ 1.29
MRPL39-201ENST00000307301 BHMT2Q9H2M3 363 aa23.11■■□□□ 1.29
MRPL39-201ENST00000307301 HCSTQ9UBK5 93 aa23.11■■□□□ 1.29
MRPL39-201ENST00000307301 HOXA2O43364 376 aa23.1■■□□□ 1.29
MRPL39-201ENST00000307301 POU5F1BQ06416 359 aa23.1■■□□□ 1.29
MRPL39-201ENST00000307301 ARL6IP4Q66PJ3 421 aaKnown RBP23.1■■□□□ 1.29
MRPL39-201ENST00000307301 IFNLR1Q8IU57 520 aaPredicted RBP23.1■■□□□ 1.29
MRPL39-201ENST00000307301 HSCBQ8IWL3 235 aa23.1■■□□□ 1.29
MRPL39-201ENST00000307301 MRPL38Q96DV4 380 aaKnown RBP23.1■■□□□ 1.29
MRPL39-201ENST00000307301 CASD1Q96PB1 797 aa23.1■■□□□ 1.29
MRPL39-201ENST00000307301 TRAIPQ9BWF2 469 aa23.1■■□□□ 1.29
MRPL39-201ENST00000307301 PLVAPQ9BX97 442 aa23.1■■□□□ 1.29
MRPL39-201ENST00000307301 TMEM117Q9H0C3 514 aa23.1■■□□□ 1.29
MRPL39-201ENST00000307301 UNC80Q8N2C7 3258 aa23.09■■□□□ 1.29
MRPL39-201ENST00000307301 E9PMD0 336 aa23.09■■□□□ 1.29
MRPL39-201ENST00000307301 INO80B-WBP1J3KQ70 363 aa23.09■■□□□ 1.29
MRPL39-201ENST00000307301 GRM6O15303 877 aa23.09■■□□□ 1.29
MRPL39-201ENST00000307301 ERLIN2O94905 339 aa23.09■■□□□ 1.29
MRPL39-201ENST00000307301 EOMESO95936 686 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms