RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 SPDYE1Q8NFV5 336 aaPredicted RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 DEPDC5O75140 1603 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 CCDC85CA6NKD9 419 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 RASA1P20936 1047 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 ALDH7A1P49419 539 aaKnown RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 ORC2Q13416 577 aaPredicted RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 PPP6R3Q5H9R7 873 aaPredicted RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 ALKBH8Q96BT7 664 aaKnown RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 SPZ1Q9BXG8 430 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 UBE4BO95155 1302 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 RRN3P2A6NIE6 340 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 CPP00450 1065 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 SOX5P35711 763 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 CCDC121Q6ZUS5 278 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 N4BP2L2Q92802 583 aaPredicted RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 IFT43Q96FT9 208 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 SEPT5Q99719 369 aaPredicted RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 PRDM10Q9NQV6 1147 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 NPHP3-ACAD11A0A0J9YXS1 232 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 TOGARAM2Q6ZUX3 1019 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 SDCCAG8Q86SQ7 713 aaPredicted RBP11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 MROH8Q9H579 483 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 DDX41Q9UJV9 622 aaKnown RBP11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 DYNC1I1O14576 645 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 DPCR1Q3MIW9 517 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 HDAC11Q96DB2 347 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 MOCS2O96007 188 aaPredicted RBP11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 PPP2R5EQ16537 467 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 KNOP1Q1ED39 458 aaKnown RBP11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 KIAA1755Q5JYT7 1200 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 SH3TC2Q8TF17 1288 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 ATP6V1E2Q96A05 226 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 TSPYL2Q9H2G4 693 aaPredicted RBP11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 SEL1LQ9UBV2 794 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 SERPING1P05155 500 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 IRF1P10914 325 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 TBXAS1P24557 533 aaPredicted RBP11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 MTMR3Q13615 1198 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 IQCB1Q15051 598 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 SGO2Q562F6 1265 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 BTBD8Q5XKL5 378 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 PRKCEQ02156 737 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 APPL2Q8NEU8 664 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 ZNF609O15014 1411 aa11.49□□□□□ -0.57
SYNPO2-201ENST00000307142 PASKQ96RG2 1323 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 HGSO14964 777 aaPredicted RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 PQBP1O60828 265 aaKnown RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 CIB2O75838 187 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 DEFB128Q7Z7B8 93 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 LRRC71Q8N4P6 559 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 SUDS3Q9H7L9 328 aaPredicted RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 SYNDIG1Q9H7V2 258 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 LRRD1A4D1F6 860 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 MOCS3O95396 460 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 CYBBP04839 570 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 TCF7P36402 384 aaPredicted RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 RAB44Q7Z6P3 723 aaPredicted RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 PCSK9Q8NBP7 692 aaKnown RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 ZNF445P59923 1031 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 RPUSD2Q8IZ73 545 aaKnown RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 DDX50Q9BQ39 737 aaKnown RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 FBXO28Q9NVF7 368 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 STXBP3O00186 592 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 STAG3L1P0CL83 205 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 PPARGP37231 505 aaPredicted RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 BASP1P80723 227 aaKnown RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 TCP11X2Q5H9J9 407 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 RUFY4Q6ZNE9 571 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 FBXO16Q8IX29 292 aaPredicted RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 KRT222Q8N1A0 295 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 MAGOHBQ96A72 148 aaKnown RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 NDST4Q9H3R1 872 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 SAMSN1Q9NSI8 373 aaKnown RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 PP2D1A8MPX8 630 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 HBP1O60381 514 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 TMEM132DQ14C87 1099 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 GKAP1Q5VSY0 366 aaPredicted RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 PLA2G4FQ68DD2 849 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 GIMAP7Q8NHV1 300 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 TAAR1Q96RJ0 339 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 GNA15P30679 374 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 ALDH1A3P47895 512 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 BZW1Q7L1Q6 419 aaKnown RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 CROCCP2Q86T23 111 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 GPT2Q8TD30 523 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 MOV10L1Q9BXT6 1211 aaKnown RBP11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 TJP2Q9UDY2 1190 aa11.48□□□□□ -0.57
SYNPO2-201ENST00000307142 MAP3K7O43318 606 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 CASP1P29466 404 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 SMAP1Q8IYB5 467 aaPredicted RBP11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 VPS33BQ9H267 617 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 OLA1Q9NTK5 396 aaKnown RBP11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 SLC4A7Q9Y6M7 1214 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 SLIT1O75093 1534 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 ZC3H4Q9UPT8 1303 aaKnown RBP11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 ICAM1P05362 532 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 ZNF131P52739 623 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 RPS6P62753 249 aaKnown RBP11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 BFSP2Q13515 415 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 DEFB115Q30KQ5 88 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms