RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 RNF149Q8NC42 400 aa27.1■■□□□ 1.93
HOXC9-201ENST00000303450 CNNM3Q8NE01 707 aa27.1■■□□□ 1.93
HOXC9-201ENST00000303450 FDXACB1Q9BRP7 624 aaPredicted RBP27.1■■□□□ 1.93
HOXC9-201ENST00000303450 GCOM2Q9BZD3 368 aaPredicted RBP27.1■■□□□ 1.93
HOXC9-201ENST00000303450 SCN5AQ14524 2016 aa27.09■■□□□ 1.93
HOXC9-201ENST00000303450 MYH11P35749 1972 aa27.09■■□□□ 1.93
HOXC9-201ENST00000303450 NBNO60934 754 aa27.09■■□□□ 1.93
HOXC9-201ENST00000303450 TBCAO75347 108 aaKnown RBP27.09■■□□□ 1.93
HOXC9-201ENST00000303450 GHRP10912 638 aa27.09■■□□□ 1.93
HOXC9-201ENST00000303450 AFMP43652 599 aa27.09■■□□□ 1.93
HOXC9-201ENST00000303450 MAPK7Q13164 816 aa27.09■■□□□ 1.93
HOXC9-201ENST00000303450 PPIGQ13427 754 aaKnown RBP eCLIP27.09■■□□□ 1.93
HOXC9-201ENST00000303450 CAPSQ13938 189 aa27.09■■□□□ 1.93
HOXC9-201ENST00000303450 PPP2R5AQ15172 486 aa27.09■■□□□ 1.93
HOXC9-201ENST00000303450 FBXO47Q5MNV8 452 aa27.09■■□□□ 1.93
HOXC9-201ENST00000303450 DEFB128Q7Z7B8 93 aa27.09■■□□□ 1.93
HOXC9-201ENST00000303450 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.08■■□□□ 1.93
HOXC9-201ENST00000303450 SFI1A8K8P3 1242 aa27.08■■□□□ 1.93
HOXC9-201ENST00000303450 FAM13AO94988 1023 aa27.08■■□□□ 1.93
HOXC9-201ENST00000303450 SNW1Q13573 536 aaKnown RBP27.08■■□□□ 1.93
HOXC9-201ENST00000303450 KRBA2Q6ZNG9 492 aa27.08■■□□□ 1.93
HOXC9-201ENST00000303450 RPUSD2Q8IZ73 545 aaKnown RBP27.08■■□□□ 1.93
HOXC9-201ENST00000303450 ENGASEQ8NFI3 743 aa27.08■■□□□ 1.93
HOXC9-201ENST00000303450 BSNDQ8WZ55 320 aa27.08■■□□□ 1.93
HOXC9-201ENST00000303450 ZHX3Q9H4I2 956 aa27.08■■□□□ 1.93
HOXC9-201ENST00000303450 C17orf75Q9HAS0 396 aa27.08■■□□□ 1.93
HOXC9-201ENST00000303450 SQORQ9Y6N5 450 aa27.08■■□□□ 1.93
HOXC9-201ENST00000303450 SIP14410 1827 aa27.08■■□□□ 1.93
HOXC9-201ENST00000303450 LRRIQ4A6NIV6 560 aa27.07■■□□□ 1.92
HOXC9-201ENST00000303450 LIG1P18858 919 aa27.07■■□□□ 1.92
HOXC9-201ENST00000303450 EIF4BP23588 611 aaKnown RBP27.07■■□□□ 1.92
HOXC9-201ENST00000303450 PHKA2P46019 1235 aa27.07■■□□□ 1.92
HOXC9-201ENST00000303450 DMP1Q13316 513 aaPredicted RBP27.07■■□□□ 1.92
HOXC9-201ENST00000303450 LPIN1Q14693 890 aa27.07■■□□□ 1.92
HOXC9-201ENST00000303450 GPNMBQ14956 572 aa27.07■■□□□ 1.92
HOXC9-201ENST00000303450 USP38Q8NB14 1042 aa27.07■■□□□ 1.92
HOXC9-201ENST00000303450 TMEM40Q8WWA1 233 aa27.07■■□□□ 1.92
HOXC9-201ENST00000303450 PAGE5Q96GU1 130 aa27.07■■□□□ 1.92
HOXC9-201ENST00000303450 CCDC34Q96HJ3 373 aa27.07■■□□□ 1.92
HOXC9-201ENST00000303450 IFT122Q9HBG6 1241 aa27.07■■□□□ 1.92
HOXC9-201ENST00000303450 NR1I2O75469 434 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 DARSP14868 501 aaKnown RBP27.06■■□□□ 1.92
HOXC9-201ENST00000303450 NAMPTP43490 491 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 PEX3P56589 373 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 POU5F1BQ06416 359 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 TSHZ1Q6ZSZ6 1077 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 DNAJC19Q96DA6 116 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 OSBPL7Q9BZF2 842 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 TRIM9Q9C026 710 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 INO80BQ9C086 356 aaPredicted RBP27.06■■□□□ 1.92
HOXC9-201ENST00000303450 PARVGQ9HBI0 331 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 LMBRD1Q9NUN5 540 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 LARSQ9P2J5 1176 aaKnown RBP27.06■■□□□ 1.92
HOXC9-201ENST00000303450 RPS6KA5O75582 802 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 CXCL10P02778 98 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 PLS3P13797 630 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 MAGEA10P43363 369 aaPredicted RBP27.06■■□□□ 1.92
HOXC9-201ENST00000303450 GRAMD1CQ8IYS0 662 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 MYCT1Q8N699 235 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 DEPTORQ8TB45 409 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 C7orf25Q9BPX7 421 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 IL23AQ9NPF7 189 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 KCNG1Q9UIX4 513 aa27.06■■□□□ 1.92
HOXC9-201ENST00000303450 NOC2LQ9Y3T9 749 aaKnown RBP27.06■■□□□ 1.92
HOXC9-201ENST00000303450 CCDC169A6NNP5 214 aa27.05■■□□□ 1.92
HOXC9-201ENST00000303450 IDEP14735 1019 aa27.05■■□□□ 1.92
HOXC9-201ENST00000303450 PTENP60484 403 aa27.05■■□□□ 1.92
HOXC9-201ENST00000303450 KANK3Q6NY19 840 aa27.05■■□□□ 1.92
HOXC9-201ENST00000303450 SRGAP1Q7Z6B7 1085 aa27.05■■□□□ 1.92
HOXC9-201ENST00000303450 IFIH1Q9BYX4 1025 aaKnown RBP27.05■■□□□ 1.92
HOXC9-201ENST00000303450 AGO3Q9H9G7 860 aaKnown RBP27.05■■□□□ 1.92
HOXC9-201ENST00000303450 KINO60870 393 aaKnown RBP27.04■■□□□ 1.92
HOXC9-201ENST00000303450 CSDE1O75534 798 aaKnown RBP27.04■■□□□ 1.92
HOXC9-201ENST00000303450 PFKMP08237 780 aa27.04■■□□□ 1.92
HOXC9-201ENST00000303450 ACRP10323 421 aa27.04■■□□□ 1.92
HOXC9-201ENST00000303450 NPTX2P47972 431 aa27.04■■□□□ 1.92
HOXC9-201ENST00000303450 ZNF131P52739 623 aa27.04■■□□□ 1.92
HOXC9-201ENST00000303450 SMTNP53814 917 aa27.04■■□□□ 1.92
HOXC9-201ENST00000303450 ASIC1P78348 528 aa27.04■■□□□ 1.92
HOXC9-201ENST00000303450 PAK2Q13177 524 aa27.04■■□□□ 1.92
HOXC9-201ENST00000303450 ODR4Q5SWX8 454 aa27.04■■□□□ 1.92
HOXC9-201ENST00000303450 ZBTB8OSQ8IWT0 167 aa27.04■■□□□ 1.92
HOXC9-201ENST00000303450 TET1Q8NFU7 2136 aa27.04■■□□□ 1.92
HOXC9-201ENST00000303450 NFKBIZQ9BYH8 718 aa27.04■■□□□ 1.92
HOXC9-201ENST00000303450 BLZF1Q9H2G9 400 aa27.04■■□□□ 1.92
HOXC9-201ENST00000303450 KMT5AQ9NQR1 393 aa27.04■■□□□ 1.92
HOXC9-201ENST00000303450 CD52P31358 61 aa27.03■■□□□ 1.92
HOXC9-201ENST00000303450 NFX1Q12986 1120 aaKnown RBP27.03■■□□□ 1.92
HOXC9-201ENST00000303450 PLEKHG4Q58EX7 1191 aa27.03■■□□□ 1.92
HOXC9-201ENST00000303450 SEPT8Q92599 483 aa27.03■■□□□ 1.92
HOXC9-201ENST00000303450 TIGD1Q96MW7 591 aa27.03■■□□□ 1.92
HOXC9-201ENST00000303450 C2orf40Q9H1Z8 148 aa27.03■■□□□ 1.92
HOXC9-201ENST00000303450 PADI3Q9ULW8 664 aa27.03■■□□□ 1.92
HOXC9-201ENST00000303450 INO80B-WBP1J3KQ70 363 aa27.02■■□□□ 1.92
HOXC9-201ENST00000303450 GPR182O15218 404 aa27.02■■□□□ 1.92
HOXC9-201ENST00000303450 MYL1P05976 194 aa27.02■■□□□ 1.92
HOXC9-201ENST00000303450 SFPQP23246 707 aaKnown RBP eCLIP27.02■■□□□ 1.92
HOXC9-201ENST00000303450 CASP1P29466 404 aa27.02■■□□□ 1.92
HOXC9-201ENST00000303450 CUL4BQ13620 913 aa27.02■■□□□ 1.92
HOXC9-201ENST00000303450 CNNM4Q6P4Q7 775 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms