RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 DDX19AQ9NUU7 478 aaKnown RBP7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 MKL2Q9ULH7 1088 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 CEP131Q9UPN4 1083 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 ATP6V1DQ9Y5K8 247 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 SRPRBQ9Y5M8 271 aaKnown RBP7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 KRBA1A5PL33 1030 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 USO1O60763 962 aaKnown RBP7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 PPP6R2O75170 966 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 DUSP11O75319 330 aaKnown RBP7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 LGR5O75473 907 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 BMP15O95972 392 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 MCM4P33991 863 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 MAP2K3P46734 347 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 JAK3P52333 1124 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 GJA9P57773 515 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 IGBP1P78318 339 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 RAD51AP2Q09MP3 1159 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 LAMC2Q13753 1193 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 MCM6Q14566 821 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 EPHA7Q15375 998 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 MTERF2Q49AM1 385 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 NAALADL2Q58DX5 795 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 ZNF746Q6NUN9 644 aaPredicted RBP7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 MIS18BP1Q6P0N0 1132 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 CATSPER3Q86XQ3 398 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 KLHDC9Q8NEP7 349 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 PPTC7Q8NI37 304 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 U2AF1L4Q8WU68 220 aaKnown RBP7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 MRPS27Q92552 414 aaKnown RBP7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 GLG1Q92896 1179 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 WNT8BQ93098 351 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 GBP4Q96PP9 640 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 SENP7Q9BQF6 1050 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 C16orf70Q9BSU1 422 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 RUSC1Q9BVN2 902 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 SCAND2PQ9GZW5 306 aaPredicted RBP7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 ZNF302Q9NR11 478 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 TBC1D22BQ9NU19 505 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 BLOC1S4Q9NUP1 217 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 SERTAD1Q9UHV2 236 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 NRBP1Q9UHY1 535 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 CFAP45Q9UL16 551 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 PCDHA12Q9UN75 941 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 KIAA1024Q9UPX6 916 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 DYRK1BQ9Y463 629 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 GRIN2DO15399 1336 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 EMSYQ7Z589 1322 aa7.26□□□□□ -1.25
DEPDC4-201ENST00000299185 A0A1W2PQ45 241 aaPredicted RBP7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 A0A1W2PQY0 241 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 ZBTB42B2RXF5 422 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 LAD1O00515 517 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 NKRFO15226 690 aaKnown RBP eCLIP7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 SLITRK3O94933 977 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 ASGR1P07306 291 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 PSAPP07602 524 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 GJB1P08034 283 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 FURINP09958 794 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 SMIM10L2AP0DMW4 78 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 SMIM10L2BP0DMW5 78 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 HOXD8P13378 290 aaPredicted RBP7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 EN2P19622 333 aaPredicted RBP7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 GPC1P35052 558 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 LONP1P36776 959 aaKnown RBP7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 PURAQ00577 322 aaKnown RBP7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 DRP2Q13474 957 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 SKIV2LQ15477 1246 aaKnown RBP7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 NFKBIBQ15653 356 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 KCNA10Q16322 511 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 FAM47CQ5HY64 1035 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 GNASQ5JWF2 1037 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 ARL6IP4Q66PJ3 421 aaKnown RBP7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 CCSAPQ6IQ19 270 aaPredicted RBP7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 RUFY4Q6ZNE9 571 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 CLEC17AQ6ZS10 378 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 MAEAQ7L5Y9 396 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 CKAP2LQ8IYA6 745 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 LRRN4Q8WUT4 740 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 SEPT1Q8WYJ6 367 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 GTPBP3Q969Y2 492 aaKnown RBP7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 BLZF1Q9H2G9 400 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 RNPEPQ9H4A4 650 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 GPRC5CQ9NQ84 441 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 HPSEQ9Y251 543 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 PCDHA10Q9Y5I2 948 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 WDR81Q562E7 1941 aa7.25□□□□□ -1.25
DEPDC4-201ENST00000299185 IGKV6D-21A0A0A0MT36 114 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 A0A1W2PQ27 194 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 A0A1W2PQ64 194 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 A0A1W2PQD8 194 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 A6NJR5 290 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 RSPH10B2B2RC85 870 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 ERVH48-1M5A8F1 160 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 POLR2DO15514 142 aaKnown RBP7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 ATG7O95352 703 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 F2P00734 622 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 RSPH10BP0C881 870 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 TGFB3P10600 412 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 UBA7P41226 1012 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 STAT6P42226 847 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms