RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 PCDHA10Q9Y5I2 948 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 SRPRBQ9Y5M8 271 aaKnown RBP6.62□□□□□ -1.35
SSX3-201ENST00000298396 H3BRB1 525 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 AXIN1O15169 862 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 PPP6R2O75170 966 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 BAG4O95429 457 aaKnown RBP6.61□□□□□ -1.35
SSX3-201ENST00000298396 BMP15O95972 392 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 IL2RAP01589 272 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 PSAPP07602 524 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 SMIM10L2AP0DMW4 78 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 SMIM10L2BP0DMW5 78 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 RFX1P22670 979 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 MARK3P27448 753 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 SFNP31947 248 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 STAT5BP51692 787 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 EPHA4P54764 986 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 PRKCEQ02156 737 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 CLN3Q13286 438 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 PDIA5Q14554 519 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 STK38Q15208 465 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 KIAA0753Q2KHM9 967 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 TMEM119Q4V9L6 283 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 HYIQ5T013 277 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 MARCH8Q5T0T0 291 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 PLA2G4FQ68DD2 849 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 ATL3Q6DD88 541 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 GDF6Q6KF10 455 aaPredicted RBP6.61□□□□□ -1.35
SSX3-201ENST00000298396 MIS18BP1Q6P0N0 1132 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 MRPL14Q6P1L8 145 aaKnown RBP6.61□□□□□ -1.35
SSX3-201ENST00000298396 SHC4Q6S5L8 630 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 SLC39A5Q6ZMH5 540 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 DTHD1Q6ZMT9 781 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 ANO5Q75V66 913 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 PLPPR4Q7Z2D5 763 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 CATSPER3Q86XQ3 398 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 LINC00528Q8N1L1 170 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 PCSK9Q8NBP7 692 aaKnown RBP6.61□□□□□ -1.35
SSX3-201ENST00000298396 LMBR1Q8WVP7 490 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 DHX38Q92620 1227 aaKnown RBP6.61□□□□□ -1.35
SSX3-201ENST00000298396 EPSTI1Q96J88 318 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 SH2D3AQ9BRG2 576 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 LXNQ9BS40 222 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 POLR3CQ9BUI4 534 aaPredicted RBP6.61□□□□□ -1.35
SSX3-201ENST00000298396 SENP6Q9GZR1 1112 aaPredicted RBP6.61□□□□□ -1.35
SSX3-201ENST00000298396 TUT1Q9H6E5 874 aaKnown RBP6.61□□□□□ -1.35
SSX3-201ENST00000298396 C11orf49Q9H6J7 331 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 SPC25Q9HBM1 224 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 ETNK1Q9HBU6 452 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 ZNF302Q9NR11 478 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 HDAC6Q9UBN7 1215 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 LRWD1Q9UFC0 647 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 ANK1P16157 1881 aa6.61□□□□□ -1.35
SSX3-201ENST00000298396 PDCD11Q14690 1871 aaKnown RBP6.6□□□□□ -1.35
SSX3-201ENST00000298396 RANBP2P49792 3224 aaKnown RBP6.6□□□□□ -1.35
SSX3-201ENST00000298396 A0A0U1RQG5 324 aaPredicted RBP6.6□□□□□ -1.35
SSX3-201ENST00000298396 MBLAC1A4D2B0 266 aaPredicted RBP6.6□□□□□ -1.35
SSX3-201ENST00000298396 ARVCFO00192 962 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 BACH1O14867 736 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 ZEB2O60315 1214 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 MARCH6O60337 910 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 B4GALT4O60513 344 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 KPNA6O60684 536 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 CABYRO75952 493 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 LYPLA2O95372 231 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 CD4P01730 458 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 P4HBP07237 508 aaKnown RBP6.6□□□□□ -1.35
SSX3-201ENST00000298396 RPA1P27694 616 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 GPC1P35052 558 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 LONP1P36776 959 aaKnown RBP6.6□□□□□ -1.35
SSX3-201ENST00000298396 QARSP47897 775 aaKnown RBP6.6□□□□□ -1.35
SSX3-201ENST00000298396 NPEPPSP55786 919 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 RTP1P59025 263 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 KRT85P78386 507 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 ITGA7Q13683 1181 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 KARSQ15046 597 aaKnown RBP6.6□□□□□ -1.35
SSX3-201ENST00000298396 TARBP2Q15633 366 aaKnown RBP6.6□□□□□ -1.35
SSX3-201ENST00000298396 TMEM266Q2M3C6 531 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 TRIM71Q2Q1W2 868 aaKnown RBP6.6□□□□□ -1.35
SSX3-201ENST00000298396 TRIM60Q495X7 471 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 NAALADL2Q58DX5 795 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 C1orf53Q5VUE5 145 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 RESP18Q5W5W9 173 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 NFRKBQ6P4R8 1299 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 RUFY4Q6ZNE9 571 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 CLEC17AQ6ZS10 378 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 SESTD1Q86VW0 696 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 ANKMY2Q8IV38 441 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 FAM126BQ8IXS8 530 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 ZNF295-AS1Q8N0V1 137 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 LINC01465Q8N7H1 131 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 SNX29Q8TEQ0 813 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 ATP8B4Q8TF62 1192 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 GLG1Q92896 1179 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 SPATA32Q96LK8 384 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 PLIN2Q99541 437 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 TRPV6Q9H1D0 765 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 GOLPH3LQ9H4A5 285 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 SMARCAD1Q9H4L7 1026 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 STARD7Q9NQZ5 370 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 BLOC1S4Q9NUP1 217 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms