RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 COPS2P61201 443 aa16.02■□□□□ 0.16
SPIDR-201ENST00000297423 IKQ13123 557 aaPredicted RBP16.02■□□□□ 0.16
SPIDR-201ENST00000297423 TAB3Q8N5C8 712 aaPredicted RBP16.02■□□□□ 0.16
SPIDR-201ENST00000297423 NUCKS1Q9H1E3 243 aaKnown RBP16.02■□□□□ 0.16
SPIDR-201ENST00000297423 DBNDD1Q9H9R9 158 aa16.02■□□□□ 0.16
SPIDR-201ENST00000297423 ETAA1Q9NY74 926 aa16.02■□□□□ 0.16
SPIDR-201ENST00000297423 HDAC9Q9UKV0 1011 aa16.02■□□□□ 0.16
SPIDR-201ENST00000297423 IL1R1P14778 569 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 PPP1R2P41236 205 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 EIF3BP55884 814 aaKnown RBP16.02■□□□□ 0.15
SPIDR-201ENST00000297423 KCNMA1Q12791 1236 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 LRRC15Q8TF66 581 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 RGS17Q9UGC6 210 aaPredicted RBP16.02■□□□□ 0.15
SPIDR-201ENST00000297423 HAO1Q9UJM8 370 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 LAMA4Q16363 1823 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 SFI1A8K8P3 1242 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 BRAFP15056 766 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 CREB1P16220 341 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 GNA11P29992 359 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 ZNF571Q7Z3V5 609 aaPredicted RBP16.02■□□□□ 0.15
SPIDR-201ENST00000297423 SPATA21Q7Z572 469 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 CCDC65Q8IXS2 484 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 P3H4Q92791 437 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 PITPNM3Q9BZ71 974 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 CCSER1Q9C0I3 900 aa16.02■□□□□ 0.15
SPIDR-201ENST00000297423 MYH7P12883 1935 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 KLRG2A4D1S0 409 aaPredicted RBP16.01■□□□□ 0.15
SPIDR-201ENST00000297423 CCDC188H7C350 402 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 STXBP3O00186 592 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 XRCC5P13010 732 aaKnown RBP16.01■□□□□ 0.15
SPIDR-201ENST00000297423 ZNF746Q6NUN9 644 aaPredicted RBP16.01■□□□□ 0.15
SPIDR-201ENST00000297423 UNC13DQ70J99 1090 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 MREGQ8N565 214 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 C18orf8Q96DM3 657 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 ERP27Q96DN0 273 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 GBP5Q96PP8 586 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 ANAPC4Q9UJX5 808 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 C4AP0C0L4 1744 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 COL4A1P02462 1669 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 POC1B-GALNT4F8VUJ3 575 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 PAPOLAP51003 745 aaKnown RBP16.01■□□□□ 0.15
SPIDR-201ENST00000297423 C6orf118Q5T5N4 469 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 ATXN2Q99700 1313 aaKnown RBP16.01■□□□□ 0.15
SPIDR-201ENST00000297423 STAT1P42224 750 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 CDK17Q00537 523 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 NPY5RQ15761 445 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 SYCE1Q8N0S2 351 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 ZNF384Q8TF68 577 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 IQCDQ96DY2 449 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 CAMKK2Q96RR4 588 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 PIGSQ96S52 555 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 NUDT12Q9BQG2 462 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 CTNNAL1Q9UBT7 734 aa16.01■□□□□ 0.15
SPIDR-201ENST00000297423 SCNN1DP51172 638 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 NCALDP61601 193 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 UBE2SQ16763 222 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 KRT25Q7Z3Z0 450 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 APBB1IPQ7Z5R6 666 aaPredicted RBP16■□□□□ 0.15
SPIDR-201ENST00000297423 VCXQ9H320 206 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 DPPA5A6NC42 116 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 THAP12O43422 761 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 KRT15P19012 456 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 RFC5P40937 340 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 GNAQP50148 359 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 SEL1L2Q5TEA6 688 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 MIS18BP1Q6P0N0 1132 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 SCYL3Q8IZE3 742 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 C3orf20Q8ND61 904 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 MTA3Q9BTC8 594 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 COL24A1Q17RW2 1714 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 BAG2O95816 211 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 ATP4AP20648 1035 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 CNGA1P29973 690 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 GALCP54803 685 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 CYP4A11Q02928 519 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 TMED2Q15363 201 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 FIGNQ5HY92 759 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 STYK1Q6J9G0 422 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 RAB3IPQ96QF0 476 aaPredicted RBP16■□□□□ 0.15
SPIDR-201ENST00000297423 FAM118BQ9BPY3 351 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 DCTN4Q9UJW0 460 aa16■□□□□ 0.15
SPIDR-201ENST00000297423 UBR3Q6ZT12 1888 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 FUT2Q10981 343 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 COASYQ13057 564 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 RCN2Q14257 317 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 GRIK5Q16478 980 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 HGSNATQ68CP4 663 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 CENPPQ6IPU0 288 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 EMILIN3Q9NT22 766 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 GCNT4Q9P109 453 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 TNFRSF8P28908 595 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 LRRC63Q05C16 580 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 PABPC4Q13310 644 aaKnown RBP eCLIP15.99■□□□□ 0.15
SPIDR-201ENST00000297423 ZNF662Q6ZS27 426 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 GUF1Q8N442 669 aaKnown RBP15.99■□□□□ 0.15
SPIDR-201ENST00000297423 TPCN2Q8NHX9 752 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 CUEDC2Q9H467 287 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 NAGPAQ9UK23 515 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 SPDYE5A6NIY4 337 aa15.99■□□□□ 0.15
SPIDR-201ENST00000297423 GCNT3O95395 438 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms